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View Structure Prediction Details

Protein: YMR027W
Organism: Saccharomyces cerevisiae
Length: 470 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YMR027W.

Description E-value Query
Range
Subject
Range
ARMT1_YEAST - Protein-glutamate O-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YM...
YMR027W - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th...
0.0 [1..470] [1..470]
C6orf211 - chromosome 6 open reading frame 211
0.0 [3..464] [4..437]
ART1B_SCHPO - Protein-glutamate O-methyltransferase C1393.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843...
SPCC1393.13 - DUF89 family protein
0.0 [8..465] [14..439]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
0.0 [8..465] [1..426]
gi|220942874, gi... - gi|220953058|gb|ACL89072.1| CG11474-PA [synthetic construct], gi|220942874|gb|ACL83980.1| CG11474-PA...
FBpp0292778, CG1... - This gene is referred to in FlyBase by the symbol Dmel\CG11474 (CG11474, FBgn0034688). It is a prote...
0.0 [11..466] [28..435]

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Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIPGRFMTI DKGTFGEYTA STRWPIIIQN AIDDLSKHQE TEKSNGTKFE QGEVIKKELK  60
   61 EFRQEIIDRV PLRPFTEEEI KIANVPLSFN EYLKKHPEVN WGAVEWLFSE VYLYRRVNVL 120
  121 FQRQCEWAKF 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.507 0.393 nucleus a.29.2 Bromodomain
View Download 0.859 0.236 cytoplasm a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.616 0.097 nucleus a.25.1 Ferritin-like
View Download 0.494 N/A N/A a.24.16 Nucleotidyltransferase substrate binding subunit/domain
View Download 0.485 N/A N/A a.24.1 Apolipoprotein
View Download 0.478 N/A N/A a.23.1 HSC20 (HSCB), C-terminal oligomerisation domain
View Download 0.401 N/A N/A a.25.2 Thermoplasma ferritin-like 4-helical bundle
View Download 0.395 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.390 N/A N/A a.26.1 4-helical cytokines
View Download 0.374 N/A N/A a.25.1 Ferritin-like
View Download 0.365 N/A N/A a.24.4 Hemerythrin
View Download 0.360 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.356 N/A N/A a.61.1 Retroviral matrix proteins
View Download 0.347 N/A N/A c.95.1 Thiolase-like
View Download 0.345 N/A N/A a.47.2 t-snare proteins
View Download 0.342 N/A N/A d.19.1 MHC antigen-recognition domain
View Download 0.342 N/A N/A a.25.1 Ferritin-like
View Download 0.336 N/A N/A a.29.5 alpha-ketoacid dehydrogenase kinase, N-terminal domain
View Download 0.335 N/A N/A a.22.1 Histone-fold
View Download 0.331 N/A N/A a.118.8 TPR-like
View Download 0.320 N/A N/A a.25.2 Thermoplasma ferritin-like 4-helical bundle
View Download 0.316 N/A N/A a.63.1 Apolipophorin-III
View Download 0.306 N/A N/A a.29.5 alpha-ketoacid dehydrogenase kinase, N-terminal domain
View Download 0.306 N/A N/A a.72.1 Functional domain of the splicing factor Prp18
View Download 0.303 N/A N/A a.25.1 Ferritin-like
View Download 0.297 N/A N/A a.7.3 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
View Download 0.287 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.282 N/A N/A a.26.1 4-helical cytokines
View Download 0.282 N/A N/A a.47.2 t-snare proteins
View Download 0.280 N/A N/A a.24.9 alpha-catenin/vinculin
View Download 0.277 N/A N/A a.39.1 EF-hand
View Download 0.274 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.269 N/A N/A a.26.1 4-helical cytokines
View Download 0.265 N/A N/A a.41.1 Domain of poly(ADP-ribose) polymerase
View Download 0.260 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.250 N/A N/A a.66.1 Transducin (alpha subunit), insertion domain
View Download 0.250 N/A N/A a.7.7 BAG domain
View Download 0.248 N/A N/A a.7.5 Tubulin chaperone cofactor A
View Download 0.248 N/A N/A a.24.14 FAT domain of focal adhesion kinase
View Download 0.247 N/A N/A a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.246 N/A N/A a.24.10 Histidine-containing phosphotransfer domain, HPT domain
View Download 0.244 N/A N/A a.63.1 Apolipophorin-III
View Download 0.244 N/A N/A a.1.1 Globin-like
View Download 0.244 N/A N/A a.26.1 4-helical cytokines
View Download 0.233 N/A N/A a.47.2 t-snare proteins
View Download 0.232 N/A N/A a.2.3 Chaperone J-domain
View Download 0.231 N/A N/A a.25.1 Ferritin-like
View Download 0.228 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.227 N/A N/A a.25.2 Thermoplasma ferritin-like 4-helical bundle
View Download 0.225 N/A N/A a.26.1 4-helical cytokines
View Download 0.224 N/A N/A a.24.4 Hemerythrin
View Download 0.220 N/A N/A a.24.3 Cytochromes
View Download 0.219 N/A N/A a.8.3 Families 57/38 glycoside transferase middle domain
View Download 0.219 N/A N/A a.29.5 alpha-ketoacid dehydrogenase kinase, N-terminal domain
View Download 0.218 N/A N/A a.72.1 Functional domain of the splicing factor Prp18
View Download 0.215 N/A N/A a.24.3 Cytochromes
View Download 0.212 N/A N/A a.7.8 GAT domain
View Download 0.211 N/A N/A a.74.1 Cyclin-like
View Download 0.211 N/A N/A b.55.1 PH domain-like
View Download 0.208 N/A N/A a.26.1 4-helical cytokines
View Download 0.208 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.204 N/A N/A a.72.1 Functional domain of the splicing factor Prp18
View Download 0.200 N/A N/A a.29.5 alpha-ketoacid dehydrogenase kinase, N-terminal domain

Predicted Domain #2
Region A:
Residues: [131-199]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIFNRLKQST FESSFYGVVE LALRYENLLP QLREMKQNPG NEIDDILKVL FKEFIEISLW  60
   61 GNATDLSLL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.932 0.348 nucleus a.7.7 BAG domain
View Download 0.904 0.348 nucleus a.13.1 alpha-2-Macroglobulin receptor associated protein (RAP) domain 1
View Download 0.851 0.348 nucleus a.2.2 Ribosomal protein L29 (L29p)
View Download 0.782 0.348 nucleus a.13.1 alpha-2-Macroglobulin receptor associated protein (RAP) domain 1
View Download 0.730 0.348 nucleus i.1.1 Ribosome and ribosomal fragments
View Download 0.715 0.348 nucleus f.17.1 F1F0 ATP synthase subunit C
View Download 0.696 0.348 nucleus a.2.8 Eukaryotic DNA topoisomerase I, dispensable insert domain
View Download 0.677 0.348 nucleus a.23.5 Hemolysin expression modulating protein HHA
View Download 0.673 0.348 nucleus a.2.8 Eukaryotic DNA topoisomerase I, dispensable insert domain
View Download 0.653 0.348 nucleus f.17.1 F1F0 ATP synthase subunit C
View Download 0.648 0.348 nucleus a.30.2 Homodimeric domain of signal transducing histidine kinase
View Download 0.644 0.348 nucleus a.2.8 Eukaryotic DNA topoisomerase I, dispensable insert domain
View Download 0.629 0.348 nucleus a.13.1 alpha-2-Macroglobulin receptor associated protein (RAP) domain 1
View Download 0.611 0.348 nucleus a.30.1 ROP protein
View Download 0.605 0.348 nucleus a.90.1 Transcription factor STAT-4 N-domain
View Download 0.600 0.348 nucleus a.2.7 tRNA-binding arm
View Download 0.598 0.348 nucleus a.13.1 alpha-2-Macroglobulin receptor associated protein (RAP) domain 1
View Download 0.593 0.348 nucleus a.2.7 tRNA-binding arm
View Download 0.584 0.348 nucleus a.2.7 tRNA-binding arm
View Download 0.576 0.348 nucleus a.16.1 S15/NS1 RNA-binding domain
View Download 0.574 0.348 nucleus i.1.1 Ribosome and ribosomal fragments
View Download 0.573 0.348 nucleus a.2.7 tRNA-binding arm
View Download 0.571 0.348 nucleus a.30.2 Homodimeric domain of signal transducing histidine kinase
View Download 0.567 0.348 nucleus d.43.1 Elongation factor Ts (EF-Ts), dimerisation domain
View Download 0.566 0.348 nucleus g.2.2 Neurotoxin B-IV
View Download 0.556 0.348 nucleus a.13.1 alpha-2-Macroglobulin receptor associated protein (RAP) domain 1
View Download 0.554 0.348 nucleus a.30.1 ROP protein
View Download 0.551 0.348 nucleus a.2.7 tRNA-binding arm
View Download 0.550 0.348 nucleus a.30.2 Homodimeric domain of signal transducing histidine kinase
View Download 0.546 0.348 nucleus f.17.1 F1F0 ATP synthase subunit C
View Download 0.542 0.348 nucleus a.30.1 ROP protein
View Download 0.534 0.348 nucleus a.24.3 Cytochromes
View Download 0.527 0.348 nucleus a.7.6 Ribosomal protein S20
View Download 0.523 0.348 nucleus a.64.1 Saposin
View Download 0.523 0.348 nucleus a.112.1 Description not found.
View Download 0.521 0.348 nucleus a.30.2 Homodimeric domain of signal transducing histidine kinase
View Download 0.518 0.348 nucleus a.2.7 tRNA-binding arm
View Download 0.517 0.348 nucleus a.2.8 Eukaryotic DNA topoisomerase I, dispensable insert domain
View Download 0.514 0.348 nucleus a.2.2 Ribosomal protein L29 (L29p)
View Download 0.512 0.348 nucleus i.1.1 Ribosome and ribosomal fragments
View Download 0.509 0.348 nucleus i.1.1 Ribosome and ribosomal fragments
View Download 0.508 0.348 nucleus a.30.1 ROP protein
View Download 0.508 0.348 nucleus a.2.2 Ribosomal protein L29 (L29p)
View Download 0.504 0.348 nucleus a.112.1 Description not found.
View Download 0.502 0.348 nucleus a.2.2 Ribosomal protein L29 (L29p)
View Download 0.502 0.348 nucleus a.30.2 Homodimeric domain of signal transducing histidine kinase
View Download 0.498 0.348 nucleus a.30.2 Homodimeric domain of signal transducing histidine kinase
View Download 0.494 0.348 nucleus a.2.3 Chaperone J-domain
View Download 0.485 0.348 nucleus a.2.3 Chaperone J-domain
View Download 0.482 0.348 nucleus a.30.2 Homodimeric domain of signal transducing histidine kinase
View Download 0.476 0.348 nucleus a.16.1 S15/NS1 RNA-binding domain
View Download 0.474 0.348 nucleus a.2.8 Eukaryotic DNA topoisomerase I, dispensable insert domain
View Download 0.470 0.348 nucleus a.2.2 Ribosomal protein L29 (L29p)
View Download 0.469 0.348 nucleus a.7.6 Ribosomal protein S20
View Download 0.465 0.348 nucleus i.1.1 Ribosome and ribosomal fragments
View Download 0.451 0.348 nucleus a.2.7 tRNA-binding arm
View Download 0.447 0.348 nucleus a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.440 0.348 nucleus a.47.2 t-snare proteins
View Download 0.439 0.348 nucleus a.2.2 Ribosomal protein L29 (L29p)
View Download 0.438 0.348 nucleus a.16.1 S15/NS1 RNA-binding domain
View Download 0.434 0.348 nucleus f.13.1 Family A G protein-coupled receptor-like
View Download 0.434 0.348 nucleus a.2.9 C-terminal UvrC-binding domain of UvrB
View Download 0.433 0.348 nucleus a.13.1 alpha-2-Macroglobulin receptor associated protein (RAP) domain 1
View Download 0.430 0.348 nucleus a.2.7 tRNA-binding arm
View Download 0.429 0.348 nucleus a.2.2 Ribosomal protein L29 (L29p)
View Download 0.429 0.348 nucleus f.13.1 Family A G protein-coupled receptor-like
View Download 0.425 0.348 nucleus a.13.1 alpha-2-Macroglobulin receptor associated protein (RAP) domain 1
View Download 0.422 0.348 nucleus f.17.1 F1F0 ATP synthase subunit C
View Download 0.422 0.348 nucleus a.144.1 PABC (PABP) domain
View Download 0.414 0.348 nucleus f.13.1 Family A G protein-coupled receptor-like
View Download 0.413 0.348 nucleus a.16.1 S15/NS1 RNA-binding domain
View Download 0.410 0.348 nucleus a.30.1 ROP protein
View Download 0.407 0.348 nucleus a.2.8 Eukaryotic DNA topoisomerase I, dispensable insert domain
View Download 0.406 0.348 nucleus d.58.18 Regulatory domain in the aminoacid metabolism
View Download 0.406 0.348 nucleus a.13.1 alpha-2-Macroglobulin receptor associated protein (RAP) domain 1
View Download 0.403 0.348 nucleus a.39.1 EF-hand
View Download 0.403 0.348 nucleus a.59.1 PAH2 domain
View Download 0.401 0.348 nucleus a.2.9 C-terminal UvrC-binding domain of UvrB
View Download 0.400 0.348 nucleus a.16.1 S15/NS1 RNA-binding domain
View Download 0.396 0.348 nucleus a.118.1 ARM repeat
View Download 0.395 0.348 nucleus a.2.2 Ribosomal protein L29 (L29p)
View Download 0.394 0.348 nucleus f.13.1 Family A G protein-coupled receptor-like
View Download 0.391 0.348 nucleus d.58.13 Anticodon-binding domain of PheRS
View Download 0.387 0.348 nucleus a.2.8 Eukaryotic DNA topoisomerase I, dispensable insert domain
View Download 0.382 0.348 nucleus a.108.1 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
View Download 0.376 0.348 nucleus a.24.13 Domain of the SRP/SRP receptor G-proteins
View Download 0.373 0.348 nucleus a.112.1 Description not found.
View Download 0.371 0.348 nucleus a.90.1 Transcription factor STAT-4 N-domain
View Download 0.370 0.348 nucleus f.17.1 F1F0 ATP synthase subunit C
View Download 0.368 0.348 nucleus d.57.1 DNA damage-inducible protein DinI
View Download 0.366 0.348 nucleus a.2.9 C-terminal UvrC-binding domain of UvrB
View Download 0.366 0.348 nucleus a.2.9 C-terminal UvrC-binding domain of UvrB
View Download 0.361 0.348 nucleus a.2.2 Ribosomal protein L29 (L29p)
View Download 0.360 0.348 nucleus a.7.6 Ribosomal protein S20
View Download 0.358 0.348 nucleus a.2.7 tRNA-binding arm
View Download 0.357 0.348 nucleus a.2.7 tRNA-binding arm
View Download 0.356 0.348 nucleus a.2.6 Effector domain of the protein kinase pkn/prk1
View Download 0.354 0.348 nucleus a.24.3 Cytochromes
View Download 0.346 0.348 nucleus a.30.1 ROP protein
View Download 0.342 0.348 nucleus d.6.1 Prion-like
View Download 0.341 0.348 nucleus a.2.8 Eukaryotic DNA topoisomerase I, dispensable insert domain
View Download 0.339 0.348 nucleus a.2.8 Eukaryotic DNA topoisomerase I, dispensable insert domain
View Download 0.338 0.348 nucleus a.16.1 S15/NS1 RNA-binding domain
View Download 0.338 0.348 nucleus f.17.1 F1F0 ATP synthase subunit C
View Download 0.335 0.348 nucleus a.2.2 Ribosomal protein L29 (L29p)
View Download 0.335 0.348 nucleus a.2.9 C-terminal UvrC-binding domain of UvrB
View Download 0.331 0.348 nucleus a.4.1 Homeodomain-like
View Download 0.331 0.348 nucleus a.2.7 tRNA-binding arm
View Download 0.329 0.348 nucleus a.16.1 S15/NS1 RNA-binding domain
View Download 0.328 0.348 nucleus a.16.1 S15/NS1 RNA-binding domain
View Download 0.326 0.348 nucleus a.2.3 Chaperone J-domain
View Download 0.321 0.348 nucleus a.2.1 GreA transcript cleavage protein, N-terminal domain
View Download 0.320 0.348 nucleus a.2.7 tRNA-binding arm
View Download 0.320 0.348 nucleus a.30.2 Homodimeric domain of signal transducing histidine kinase
View Download 0.316 0.348 nucleus d.58.23 Probable ACP-binding domain of malonyl-CoA ACP transacylase
View Download 0.316 0.348 nucleus d.58.16 Poly(A) polymerase, C-terminal domain
View Download 0.309 0.348 nucleus a.2.8 Eukaryotic DNA topoisomerase I, dispensable insert domain
View Download 0.307 0.348 nucleus a.7.5 Tubulin chaperone cofactor A
View Download 0.307 0.348 nucleus a.24.3 Cytochromes
View Download 0.306 0.348 nucleus a.13.1 alpha-2-Macroglobulin receptor associated protein (RAP) domain 1
View Download 0.300 0.348 nucleus a.4.1 Homeodomain-like
View Download 0.300 0.348 nucleus a.4.5 "Winged helix" DNA-binding domain
View Download 0.297 0.348 nucleus a.2.1 GreA transcript cleavage protein, N-terminal domain
View Download 0.296 0.348 nucleus a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.294 0.348 nucleus a.30.1 ROP protein
View Download 0.293 0.348 nucleus g.2.2 Neurotoxin B-IV
View Download 0.283 0.348 nucleus a.30.2 Homodimeric domain of signal transducing histidine kinase
View Download 0.283 0.348 nucleus a.30.1 ROP protein
View Download 0.282 0.348 nucleus d.58.43 Mechanosensitive channel protein MscS (YggB), C-terminal domain
View Download 0.281 0.348 nucleus a.46.1 Methionine synthase domain
View Download 0.279 0.348 nucleus d.6.1 Prion-like
View Download 0.278 0.348 nucleus a.30.2 Homodimeric domain of signal transducing histidine kinase
View Download 0.276 0.348 nucleus a.2.2 Ribosomal protein L29 (L29p)
View Download 0.274 0.348 nucleus a.2.11 Fe,Mn superoxide dismutase (SOD), N-terminal domain
View Download 0.273 0.348 nucleus a.13.1 alpha-2-Macroglobulin receptor associated protein (RAP) domain 1
View Download 0.269 0.348 nucleus a.7.6 Ribosomal protein S20
View Download 0.267 0.348 nucleus a.2.6 Effector domain of the protein kinase pkn/prk1
View Download 0.267 0.348 nucleus f.17.1 F1F0 ATP synthase subunit C
View Download 0.266 0.348 nucleus a.133.1 Phospholipase A2, PLA2
View Download 0.264 0.348 nucleus a.30.2 Homodimeric domain of signal transducing histidine kinase
View Download 0.260 0.348 nucleus a.13.1 alpha-2-Macroglobulin receptor associated protein (RAP) domain 1
View Download 0.260 0.348 nucleus a.7.6 Ribosomal protein S20
View Download 0.259 0.348 nucleus a.25.1 Ferritin-like
View Download 0.258 0.348 nucleus a.7.6 Ribosomal protein S20
View Download 0.257 0.348 nucleus f.28.1 Nonheme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
View Download 0.256 0.348 nucleus a.23.1 HSC20 (HSCB), C-terminal oligomerisation domain
View Download 0.256 0.348 nucleus a.23.1 HSC20 (HSCB), C-terminal oligomerisation domain
View Download 0.256 0.348 nucleus a.23.1 HSC20 (HSCB), C-terminal oligomerisation domain
View Download 0.256 0.348 nucleus a.2.8 Eukaryotic DNA topoisomerase I, dispensable insert domain
View Download 0.254 0.348 nucleus a.2.8 Eukaryotic DNA topoisomerase I, dispensable insert domain
View Download 0.254 0.348 nucleus a.2.8 Eukaryotic DNA topoisomerase I, dispensable insert domain
View Download 0.254 0.348 nucleus a.118.1 ARM repeat
View Download 0.252 0.348 nucleus a.2.10 Epsilon subunit of F1F0-ATP synthase C-terminal domain
View Download 0.250 0.348 nucleus a.30.2 Homodimeric domain of signal transducing histidine kinase
View Download 0.250 0.348 nucleus a.30.2 Homodimeric domain of signal transducing histidine kinase
View Download 0.249 0.348 nucleus f.15.1 Small-conductance potassium channel
View Download 0.248 0.348 nucleus d.58.17 Metal-binding domain
View Download 0.248 0.348 nucleus f.13.1 Family A G protein-coupled receptor-like
View Download 0.246 0.348 nucleus g.2.2 Neurotoxin B-IV
View Download 0.245 0.348 nucleus a.4.9 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
View Download 0.244 0.348 nucleus a.16.1 S15/NS1 RNA-binding domain
View Download 0.244 0.348 nucleus a.24.7 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
View Download 0.244 0.348 nucleus f.13.1 Family A G protein-coupled receptor-like
View Download 0.243 0.348 nucleus a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.242 0.348 nucleus d.96.1 Tetrahydrobiopterin biosynthesis enzymes-like
View Download 0.242 0.348 nucleus a.4.9 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
View Download 0.241 0.348 nucleus a.2.1 GreA transcript cleavage protein, N-terminal domain
View Download 0.241 0.348 nucleus a.2.6 Effector domain of the protein kinase pkn/prk1
View Download 0.240 0.348 nucleus a.30.2 Homodimeric domain of signal transducing histidine kinase
View Download 0.238 0.348 nucleus a.30.1 ROP protein
View Download 0.238 0.348 nucleus d.58.44 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
View Download 0.236 0.348 nucleus a.26.1 4-helical cytokines
View Download 0.236 0.348 nucleus a.16.1 S15/NS1 RNA-binding domain
View Download 0.234 0.348 nucleus a.30.2 Homodimeric domain of signal transducing histidine kinase
View Download 0.233 0.348 nucleus d.58.13 Anticodon-binding domain of PheRS
View Download 0.233 0.348 nucleus a.24.3 Cytochromes
View Download 0.232 0.348 nucleus a.7.1 Spectrin repeat
View Download 0.231 0.348 nucleus d.58.43 Mechanosensitive channel protein MscS (YggB), C-terminal domain
View Download 0.229 0.348 nucleus a.23.1 HSC20 (HSCB), C-terminal oligomerisation domain
View Download 0.229 0.348 nucleus a.2.1 GreA transcript cleavage protein, N-terminal domain
View Download 0.228 0.348 nucleus a.74.1 Cyclin-like
View Download 0.228 0.348 nucleus a.157.1 Skp1 dimerisation domain-like
View Download 0.228 0.348 nucleus a.30.1 ROP protein
View Download 0.228 0.348 nucleus a.6.1 Putative DNA-binding domain
View Download 0.226 0.348 nucleus a.2.1 GreA transcript cleavage protein, N-terminal domain
View Download 0.225 0.348 nucleus a.23.5 Hemolysin expression modulating protein HHA
View Download 0.224 0.348 nucleus a.2.2 Ribosomal protein L29 (L29p)
View Download 0.224 0.348 nucleus d.57.1 DNA damage-inducible protein DinI
View Download 0.224 0.348 nucleus d.58.17 Metal-binding domain
View Download 0.224 0.348 nucleus a.50.1 Anaphylotoxins (complement system)
View Download 0.224 0.348 nucleus a.30.2 Homodimeric domain of signal transducing histidine kinase
View Download 0.223 0.348 nucleus a.2.11 Fe,Mn superoxide dismutase (SOD), N-terminal domain
View Download 0.222 0.348 nucleus a.37.1 A DNA-binding domain in eukaryotic transcription factors
View Download 0.222 0.348 nucleus f.17.1 F1F0 ATP synthase subunit C
View Download 0.221 0.348 nucleus a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.221 0.348 nucleus a.4.1 Homeodomain-like
View Download 0.220 0.348 nucleus f.17.1 F1F0 ATP synthase subunit C
View Download 0.220 0.348 nucleus a.46.1 Methionine synthase domain
View Download 0.218 0.348 nucleus a.7.8 GAT domain
View Download 0.217 0.348 nucleus a.64.1 Saposin
View Download 0.214 0.348 nucleus a.7.1 Spectrin repeat
View Download 0.213 0.348 nucleus d.43.1 Elongation factor Ts (EF-Ts), dimerisation domain
View Download 0.213 0.348 nucleus a.24.13 Domain of the SRP/SRP receptor G-proteins
View Download 0.213 0.348 nucleus a.4.1 Homeodomain-like
View Download 0.212 0.348 nucleus a.164.1 C-terminal domain of DFF45/ICAD (DFF-C domain)
View Download 0.212 0.348 nucleus a.24.12 Outer surface protein C (OspC)
View Download 0.211 0.348 nucleus a.2.8 Eukaryotic DNA topoisomerase I, dispensable insert domain
View Download 0.210 0.348 nucleus a.16.1 S15/NS1 RNA-binding domain
View Download 0.209 0.348 nucleus a.2.7 tRNA-binding arm
View Download 0.209 0.348 nucleus d.58.17 Metal-binding domain
View Download 0.209 0.348 nucleus g.57.1 Serine proteinase inhibitor lekti
View Download 0.208 0.348 nucleus f.13.1 Family A G protein-coupled receptor-like
View Download 0.208 0.348 nucleus a.2.9 C-terminal UvrC-binding domain of UvrB
View Download 0.206 0.348 nucleus a.32.1 Transcription factor IIA (TFIIA), alpha-helical domain
View Download 0.206 0.348 nucleus a.23.1 HSC20 (HSCB), C-terminal oligomerisation domain
View Download 0.205 0.348 nucleus a.23.5 Hemolysin expression modulating protein HHA
View Download 0.205 0.348 nucleus d.58.8 Viral DNA-binding domain
View Download 0.204 0.348 nucleus a.2.11 Fe,Mn superoxide dismutase (SOD), N-terminal domain
View Download 0.204 0.348 nucleus a.118.1 ARM repeat
View Download 0.203 0.348 nucleus d.58.13 Anticodon-binding domain of PheRS
View Download 0.203 0.348 nucleus f.13.1 Family A G protein-coupled receptor-like
View Download 0.203 0.348 nucleus f.17.1 F1F0 ATP synthase subunit C
View Download 0.202 0.348 nucleus f.34.1 Mechanosensitive channel protein MscS (YggB), transmembrane region
View Download 0.202 0.348 nucleus a.13.1 alpha-2-Macroglobulin receptor associated protein (RAP) domain 1
View Download 0.201 0.348 nucleus a.4.8 Ribosomal protein S18
View Download 0.201 0.348 nucleus d.29.1 Ribosomal protein L31e

Predicted Domain #3
Region A:
Residues: [200-470]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TNATLEDIKS IQGAKARAAS ESKIVVNDTE KAWEVLTKAR ADANSREIRV DFVLDNSGFE  60
   61 LYADLMLAAF LLQSGLATKC IFHAKDIPYM VSDVMLKDFD ILVHDLRDRE FFPSGEPSTK 120
  121 ESRALDLFAG EMEKFVSSGK IEFREDSFWT TELDYWNLDA NETKYHGSIL HKDLQKSNLV 180
  181 IFKGDLNYRK LTGDRKWPRT TKWETAIGPL ATNGITSLSL RTCKADVQVA LPEGLDAKLS 240
  241 QEWEKENPGR GSWWCCSGKW AVICFCSGIH K

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle