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Protein Overview: GRC3

General Information:
Name(s) found: GRC3 / YLL035W [SGD]
Description(s) found:
Found 22 descriptions.
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  • Protein of unknown function, required for cell growth and possibly involved in rRNA processing; mRNA is cell cycle regulated [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 632 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: ribosome biogenesis [RCALink to PubMed article]
    rRNA processing [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIDSKQDLP QYTKDSGSES DSDSSNNFIV ESPSIPSSKS ATVVLNSEEY EDDEGDDLNG  60
   61 LDAELIDNIT YEGDEDETMF VGLKEKQKLH LSGVFRLQVV KGGIVYNNVH YNASREILTF 120
  121 WHPLSQSIPT IDFSHFAGWQ DTFFMPRNNR FKIRDEEFKS FPCVLRVFNS NHTGLLEAGH 180
  181 LYRDVNYLWK PKEPYFPLNE RTTYHLLHES DRIQSLSVPG YWSTPLEKLY LSHKNAAYDT 240
  241 RIMVIGGKNS GKSTFLRLLL EKFTQDIRDS TTSQEELVYL DLDPGQPEYS LPDSISLNKI 300
  301 LSSPISLGQH LCQGSNFQTL LQFYAGSSSP QDEPTSYLNC ADKLIDHLEE QAFFGTSLLN 360
  361 LPGWIKGFGM QILNHIIRKY KPTHLLFLET ANSKRHLDEL TIPQSFSTSL RDAYAPEVVR 420
  421 VPAHSLNHTL SSRFHASQLR TFKILALFHK ITQFDYDFAP LLKSAPLQIS YGKGKSGIKG 480
  481 IQFPMEFQDL NPQDIKSALE GTVIGIYTYS GEDSLEVKSL NTFPILQSCT SSSKNFITLG 540
  541 LIHSIDTSQQ IMNIYVPPCH TQILDKQPED AQWIIVRNKT ETPFCDFLPS PRTITWDDNI 600
  601 QIPFATFERR KKLEHVWKVR KNVMRRGQFM KR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
    View Run RPA135 No Comments Schneider, DA, et al. (2006)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..196] deduced N/A No confident structure predictions are available.
    2 View Details [197..401] ORFEUS 9.02 MsbA
    3 View Details [402..632] MSA 1.030944 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle