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Protein Overview: YPS6

General Information:
Name(s) found: YPS6 / YIR039C [SGD]
Description(s) found:
Found 20 descriptions.
SHOW ALL
  • Putative GPI-anchored aspartic protease [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 537 amino acids

    Gene Ontology:
    Cellular Component: fungal-type cell wall [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: aspartic-type endopeptidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLISILSLL SSLMCSLTVL GSSASSYVKF PVQKLADIIN ICTQDVSTVF KRNEVLNTTV  60
   61 INGIGVYVVK MEIGTPPQTL YLQLDTGSSD MIVNNADIAY CKSMSDGSDY ASTDNYELTA 120
  121 TFNGLPSTTI SSEAYNTLCS YWGTFDASNS STFENNATFF NNTYGDGTYY AGTYGTDVVS 180
  181 FENITLNDFT FGVSNDTIGN PSGILGISLP IAEFTDGIEY ALALNRTPFI YDNFPMELKN 240
  241 QGKINKIAYS LFLNGPDAHF GSILFGAVDK SKYTGQLYTL PMLQAFNTLG SNPGMIITAQ 300
  301 SVAILDSESG NKTVSDIQFP VMLDSGTTFS YLPTEIAEAI GKSFDGEYSS DDQGYIFDCS 360
  361 KVNDTLLSVD FGGFNISANI SNFVTSAKDR CVLNVKQSES TYMLGDAFLV DAYVVYDLEN 420
  421 YEISIAQASF NNQEEDIEVI SDTVPGATPA PGYFSTWVYK PGSPIGTGDF INVSWTSYSE 480
  481 FSQYKSLLAT AAQSDDASSF SSSGGSSEST TKKQNAGYKY RSSFSFSLLS FISYFLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen RGT2 YPS6 2 Unpublished Fields Lab Data
    View Screen BOI2 YPS6 2 Unpublished Fields Lab Data
    View Screen ROM2 YPS6 2 Unpublished Fields Lab Data
    View Screen UBC6 YPS6 1 Unpublished Fields Lab Data
    View Screen ROM1 YPS6 1 Unpublished Fields Lab Data
    View Screen RRB1 YPS6 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..68]
    [245..281]
    [411..451]    		 PSI-BLAST 553.38764 No description for 1ypsA_ was found.
    2 View Details [69..244]
    [282..410]    		 PSI-BLAST 553.38764 No description for 1ypsA_ was found.
    3 View Details [452..537] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • aspartic-type endopeptidase activity
    		•  7.68175187751599 bayes_pls_golite062009
  • aspartic-type peptidase activity
    		•  7.68175187751599 bayes_pls_golite062009
  • peptidase activity
    		•  3.09986068674657 bayes_pls_golite062009
  • endopeptidase activity
    		•  3.08503547117772 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  2.89367142096521 bayes_pls_golite062009
  • hydrolase activity
    		•  2.46470106080415 bayes_pls_golite062009
  • catalytic activity
    		•  1.54514410489082 bayes_pls_golite062009
  • binding
    		•  0.742107862879277 bayes_pls_golite062009
  • protein binding
    		•  0.401296299316154 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle