| Protein: | YPS6 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 537 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPS6.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..428] | [1..379] |
|
|
0.0 | [1..428] | [1..379] |
|
|
0.0 | [1..428] | [1..379] |
|
|
0.0 | [1..429] | [1..386] |
|
Region A: Residues: [1-68] |
1 11 21 31 41 51
| | | | | |
1 MQLISILSLL SSLMCSLTVL GSSASSYVKF PVQKLADIIN ICTQDVSTVF KRNEVLNTTV 60
61 INGIGVYV
|
|
Region B: Residues: [245-281] |
1 11 21 31 41 51
| | | | | |
1 NKIAYSLFLN GPDAHFGSIL FGAVDKSKYT GQLYTLP
|
|
Region C: Residues: [411-451] |
1 11 21 31 41 51
| | | | | |
1 DAYVVYDLEN YEISIAQASF NNQEEDIEVI SDTVPGATPA P
|
| Detection Method: |  |
| Confidence: | 553.38764 |
| Match: | 1ypsA_ |
| Description: | No description for 1ypsA_ was found. |
| Term | Confidence | Notes |
| aspartic-type endopeptidase activity | 7.68175187751599 | bayes_pls_golite062009 |
| aspartic-type peptidase activity | 7.68175187751599 | bayes_pls_golite062009 |
| peptidase activity | 3.09986068674657 | bayes_pls_golite062009 |
| endopeptidase activity | 3.08503547117772 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 2.89367142096521 | bayes_pls_golite062009 |
| hydrolase activity | 2.46470106080415 | bayes_pls_golite062009 |
| catalytic activity | 1.54514410489082 | bayes_pls_golite062009 |
| binding | 0.742107862879277 | bayes_pls_golite062009 |
| protein binding | 0.401296299316154 | bayes_pls_golite062009 |
|
Region A: Residues: [69-244] |
1 11 21 31 41 51
| | | | | |
1 VKMEIGTPPQ TLYLQLDTGS SDMIVNNADI AYCKSMSDGS DYASTDNYEL TATFNGLPST 60
61 TISSEAYNTL CSYWGTFDAS NSSTFENNAT FFNNTYGDGT YYAGTYGTDV VSFENITLND 120
121 FTFGVSNDTI GNPSGILGIS LPIAEFTDGI EYALALNRTP FIYDNFPMEL KNQGKI
|
|
Region B: Residues: [282-410] |
1 11 21 31 41 51
| | | | | |
1 MLQAFNTLGS NPGMIITAQS VAILDSESGN KTVSDIQFPV MLDSGTTFSY LPTEIAEAIG 60
61 KSFDGEYSSD DQGYIFDCSK VNDTLLSVDF GGFNISANIS NFVTSAKDRC VLNVKQSEST 120
121 YMLGDAFLV
|
| Detection Method: | |
| Confidence: | 553.38764 |
| Match: | 1ypsA_ |
| Description: | No description for 1ypsA_ was found. |
|
Region A: Residues: [452-537] |
1 11 21 31 41 51
| | | | | |
1 GYFSTWVYKP GSPIGTGDFI NVSWTSYSEF SQYKSLLATA AQSDDASSFS SSGGSSESTT 60
61 KKQNAGYKYR SSFSFSLLSF ISYFLL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
