Protein Overview: YHR097C

General Information:
Name(s) found:	YHR097C [SGD]
Description(s) found: SHOW ONLY BEST	gi\|731687\|sp\|P38809.1\|YHP7_YEAST RecName: Full=Uncharacterized protein YHR097C [NCBI NR] gi\|6321889\|ref\|NP_011965.1\| Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; Yhr097cp [Saccharomyces cerevisiae] [NCBI NR] gi\|626644\|pir\|\|S46727 hypothetical protein YHR097c - yeast (Saccharomyces cerevisiae) [NCBI NR] gi\|487941\|gb\|AAB68935.1\| Yhr097cp [Saccharomyces cerevisiae] [NCBI NR] Uncharacterized protein YHR097C OS=Saccharomyces cerevisiae GN=YHR097C PE=1 SV=1 [Swiss-Prot] Protein of unknown function localised to cytoplasm and nucleus [mips] Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus [SGD] YHR097C, Chr VIII from 297387-297511,297636-298611, reverse complement [yeast_orfs2] Chr VIII from 297387-297511,297636-298611, reverse complement [yeastorf3.fasta] Chr VIII from 298611-298487,298362-297387, reverse complement [yeastorf5.fasta] (P38809) Hypothetical 40.7 kDa protein in HXT5-NRK1 intergenic region [4932.FASTACCERV.txt] YHR097C SGDID:S0001139, Chr VIII from 298611-298487,298362-297387, reverse complement, Uncharacterized ORF [yeastflysequest.fasta] Yhr097cp [Saccharomyces cerevisiae]gi\|731687\|sp\|P38809\|YHP7_YEAST Hypothetical 40.7 kDa protein in HXT5-NRK1 intergenic regiongi\|626644\|pir\|\|S46727 hypothetical protein YHR097c - yeast (Saccharomyces cerevisiae)gi\|487941\|gb\|AAB68935.1\| Yhr097cp [Saccha [nrdb_11152004_Chlamydomonas] YHR097C SGDID:S000001139, Chr VIII from 298612-298488,298363-297388, reverse complement, Uncharacterized ORF, "Hypothetical protein" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta] YHR097C SGDID:S000001139, Chr VIII from 298612-298488,298363-297388, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus" [yeast-contam.fasta] Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; Yhr097cp [Saccharomyces cerevisiae] [nr-271106-contam.fasta] Yhr097cp [Saccharomyces cerevisiae] [nr-271106-contam.fasta] Uncharacterized protein YHR097C [nr-271106-contam.fasta] [chemostatdb.fasta] Uncharacterized protein YHR097C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHR097C PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta] YHR097C SGDID:S000001139, Chr VIII from 298360-297385,298609-298485, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus" [yeast-030211-contam.fasta] YHR097C SGDID:S000001139, Chr VIII from 298360-297385,298609-298485, Genome Release 64-2-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; YHR097C has a paralog, PAL1, that arose from the whole genome duplication" [20141208_orf_trans.fasta]
Organism:	Saccharomyces cerevisiae
Length:	366 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA] cytoplasm [IDA]
Biological Process:	biological_process [ND]
Molecular Function:	molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQTGRTIGG PQNGVNTVIN PFRVSPSEDR VSSRDETPRN YNNPFLNEDD TRRAHNSSVS  60
   61 NSRQERLPSY EEAAGTPKQQ APYPKEKKRS SGSNSHQHNH HHHRRTSHGH RDKDKQKSKS 120
  121 RTKVKPPKNV DTIDKMDVTG LFGGSFHHDG PFDACTPQRN KNNKVAPVLA FPADGPNNTV 180
  181 GGRTSKKSTL DEVFGRETVD DDSETLNQLQ DRAYLFNKAN SSTTTLDAIK PNSKNITQFD 240
  241 SKMKTELVHG PITMGLGSTT FLDGAPASSA AIEQDVINHA QESRRKNSIA RKKSLPSRRH 300
  301 LQVNNNNLKL VKTHSGHLEQ KDVDDNRTSV PVTATQGSGH EDVVKKENTG NKLLRRVKSL 360
  361 KTSKKH

Protein Complex Data

	PUBLICATION	TOPOLOGY	COCOMPLEXED PROTEINS
View Details	Krogan NJ, et al. (2006)		CPR5 MDH3 PFS1 YDR248C YHL008C YHR097C

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	RPA135	No Comments	Schneider, DA, et al. (2006)
View Run	MLP2	#29 Asynchronous Prep5-TiO2 Flowthrough	Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

	BAIT	PREY	HITS	PUBLICATION
View Screen	CHL4	YHR097C	1	Unpublished Fields Lab Data

Microscopy / Localization Data

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	PROTEIN(S)	PUBLICATION
View Data	YHR097C	Huh WK, et al. (2003)

Protein Structure Data

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Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..122]	MSA	1.027996	View MSA. No confident structure predictions are available.
2	View Details	[123..298]	Pfam	80.086186	No description for PF08316.2 was found. No confident structure predictions are available.
3	View Details	[299..366]	deduced	N/A	No confident structure predictions are available.

Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2