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Protein Overview: MAL13

General Information:
Name(s) found: MAL13 / YGR288W [SGD]
Description(s) found:
Found 26 descriptions.
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  • MAL-activator protein, part of complex locus MAL1; nonfunctional in genomic reference strain S288C [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 473 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISSLink to PubMed article]
    Biological Process: carbohydrate metabolic process [IGILink to PubMed article]
    regulation of transcription, DNA-dependent [ISSLink to PubMed article]
    Molecular Function: transcription factor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLTKQTCAK QACDCCRIRR VKCDGKRPCS SCLQNSLDCT YLQPSRKRGP KSIRLRSLKR  60
   61 IAEVQRESGP NTIATAPVIY KRVPKKLIDQ CLRLYHDNLY VIWPLLSYDD LHKLLEEKYN 120
  121 DNYVYWFLTA LSAATLSDLQ TEIKSEEEVT FTGKQLSNLC ISSCQQFDDL DNSNIFNIMT 180
  181 YYCLHRSFAQ ISNARTSYRL CCEAVGLITV AGLHREETYG SLTFEEQQLR RKLYYLLLMT 240
  241 ERYYAIYLHC ATSLDATIAP PQLELVTDPQ LSMDSFLEMI RVFTVPGKCF FDALAADSTD 300
  301 ASCTEESLKK IWNELHTTSS EIEPWSNGYI DISFSRHWIR ILAWKLAYQM RGSNFSLNAN 360
  361 NGQIPIEIAR DMLIDTYLTP ENLYDVHGPG VPVKTLEIAT ALVDIVGQYD HNMKLEAWNV 420
  421 LHDVCKFAFS LNHYNNDMLK RFSTKCQNAL ITLPISKPLQ LDGYPKDNED IDP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..73] PSI-BLAST 48.09691 PUT3
    2 View Details [74..352] MSA 18.124987 View MSA. No confident structure predictions are available.
    3 View Details [353..473] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  4.56444258780502 bayes_pls_golite062009
  • DNA binding
    		•  4.26146437716972 bayes_pls_golite062009
  • nucleic acid binding
    		•  4.17369933547911 bayes_pls_golite062009
  • transcription factor activity
    		•  3.049435548132 bayes_pls_golite062009
  • binding
    		•  2.91929847152301 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  2.03201524223606 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  1.87955444697212 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
    		•  1.86200506906385 bayes_pls_golite062009
  • transcription activator activity
    		•  0.915626626047549 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle