| Protein: | MAL13 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 473 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MAL13.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [9..473] | [4..470] |
|
|
0.0 | [9..473] | [4..470] |
|
Region A: Residues: [1-73] |
1 11 21 31 41 51
| | | | | |
1 MTLTKQTCAK QACDCCRIRR VKCDGKRPCS SCLQNSLDCT YLQPSRKRGP KSIRLRSLKR 60
61 IAEVQRESGP NTI
|
| Detection Method: |  |
| Confidence: | 48.09691 |
| Match: | 1zmeC_ |
| Description: | PUT3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.56444258780502 | bayes_pls_golite062009 |
| DNA binding | 4.26146437716972 | bayes_pls_golite062009 |
| nucleic acid binding | 4.17369933547911 | bayes_pls_golite062009 |
| transcription factor activity | 3.049435548132 | bayes_pls_golite062009 |
| binding | 2.91929847152301 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.03201524223606 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.87955444697212 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.86200506906385 | bayes_pls_golite062009 |
| transcription activator activity | 0.915626626047549 | bayes_pls_golite062009 |
|
Region A: Residues: [74-352] |
1 11 21 31 41 51
| | | | | |
1 ATAPVIYKRV PKKLIDQCLR LYHDNLYVIW PLLSYDDLHK LLEEKYNDNY VYWFLTALSA 60
61 ATLSDLQTEI KSEEEVTFTG KQLSNLCISS CQQFDDLDNS NIFNIMTYYC LHRSFAQISN 120
121 ARTSYRLCCE AVGLITVAGL HREETYGSLT FEEQQLRRKL YYLLLMTERY YAIYLHCATS 180
181 LDATIAPPQL ELVTDPQLSM DSFLEMIRVF TVPGKCFFDA LAADSTDASC TEESLKKIWN 240
241 ELHTTSSEIE PWSNGYIDIS FSRHWIRILA WKLAYQMRG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [353-473] |
1 11 21 31 41 51
| | | | | |
1 SNFSLNANNG QIPIEIARDM LIDTYLTPEN LYDVHGPGVP VKTLEIATAL VDIVGQYDHN 60
61 MKLEAWNVLH DVCKFAFSLN HYNNDMLKRF STKCQNALIT LPISKPLQLD GYPKDNEDID 120
121 P
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
