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Protein Overview: YGR117C

General Information:
Name(s) found: YGR117C [SGD]
Description(s) found:
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  • gi|6321555|ref|NP_011632.1| Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; Ygr117cp [Saccharomyces cerevisiae] [NCBI NR]
  • pir||S64425 hypothetical protein YGR117c - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|1723702|sp|P53270.1|YG32_YEAST RecName: Full=Uncharacterized protein YGR117C [NCBI NR]
  • gi|1323189|emb|CAA97125.1| unnamed protein product [Saccharomyces cerevisiae] [NCBI NR]
  • Uncharacterized protein YGR117C OS=Saccharomyces cerevisiae GN=YGR117C PE=1 SV=1 [Swiss-Prot]
  • Protein of unknown function localised to cytoplasm [mips]
  • Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm [SGD]
  • YGR117C, Chr VII from 725043-726473, reverse complement [yeast_orfs2]
  • Chr VII from 725043-726473, reverse complement [yeastorf3.fasta]
  • Chr VII from 725050-726480, reverse complement [yeastorf4.fasta]
  • Chr VII from 726480-725050, reverse complement [yeastorf5.fasta]
  • (P53270) Hypothetical 53.4 kDa protein in SPT6-RPS23A intergenic region [4932.FASTACCERV.txt]
  • YGR117C SGDID:S0003349, Chr VII from 726481-725051, reverse complement, Uncharacterized ORF [yeastflysequest.fasta]
  • YGR117C SGDID:S0003349, Chr VII from 726483-725053, reverse complement, Uncharacterized ORF [10112005cervSGD.fasta]
  • Ygr117cp [Saccharomyces cerevisiae]gi|1323189|emb|CAA97125.1| unnamed protein product [Saccharomyces cerevisiae]gi|2131674|pir||S64425 hypothetical protein YGR117c - yeast (Saccharomyces cerevisiae)gi|1723702|sp|P53270|YG32_YEAST HYPOTHETICAL 53.4 KD P [nrdb_11152004_Chlamydomonas]
  • YGR117C SGDID:S000003349, Chr VII from 726483-725053, reverse complement, Uncharacterized ORF, "Hypothetical protein" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • YGR117C SGDID:S000003349, Chr VII from 726483-725053, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm" [yeast-contam.fasta]
  • unnamed protein product [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; Ygr117cp [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Hypothetical 53.4 kDa protein in SPT6-RPS23A intergenic region [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
  • Uncharacterized protein YGR117C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGR117C PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • YGR117C SGDID:S000003349, Chr VII from 726479-725049, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm" [yeast-030211-contam.fasta]
  • YGR117C SGDID:S000003349, Chr VII from 726479-725049, Genome Release 64-2-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm" [20141208_orf_trans.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 476 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADNSTSRFY TNLLIANYLK HNGLEDTLAA FIRETALPLS ALEKSDSSNS NVGEIPLEDL  60
   61 QSVVEDRIYY KRRSFKDRFK TLSINDDLAP IDNAKYGIQP WNHSLKFSID VKLNKSLPKD 120
  121 TLFISATFTE DSKYILLSSA TGYLVIYDIE KATSKSFKIN EKVKSIVKLY GPIGSSGYQY 180
  181 VCPMNGSFYL LNNDFELVNN AVWKIHARMI THIKICNVTE SSWFVITSGM DNFLRLSLLE 240
  241 IKNGNTFLTK LSEIKLASNC TSLNVIANGD GNGQNSFSVF LTRAEYTHIA CYSIIDAKNL 300
  301 VHSYNIALNN AEFSTYAFNI RDVMAVDYVH SNTKDTIGLS PSTMLVVATS HKPYMRLILV 360
  361 EIPMNTGHPK AMKLDKVQTY YDKILRNFAT EIYQDDFSLP ILGKLESSNG VLVGNDEGIY 420
  421 SVDLMTGDSR ILNIPGEANS LHDRIKCMDI SKDQMRMVAG TSTKSIYILN VIRNAQ

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Qiu et al. (2008) AST2 ATG27 PUF2 RPL27B YGR117C YPL199C

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run ALG13 No Comments Hazbun TR, et al. (2003)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YGR117C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..476] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.365473879287901 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle