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View Structure Prediction Details

Protein: YGR117C
Organism: Saccharomyces cerevisiae
Length: 476 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YGR117C.

Description E-value Query
Range
Subject
Range
YGR117C - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th...
gi|190406866 - gi|190406866|gb|EDV10133.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
YG32_YEAST - Uncharacterized protein YGR117C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGR117C ...
gi|151943396 - gi|151943396|gb|EDN61707.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|207345101 - gi|207345101|gb|EDZ72032.1| YGR117Cp-like protein [Saccharomyces cerevisiae AWRI1631]
0.0 [1..476] [1..476]

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Predicted Domain #1
Region A:
Residues: [1-476]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADNSTSRFY TNLLIANYLK HNGLEDTLAA FIRETALPLS ALEKSDSSNS NVGEIPLEDL  60
   61 QSVVEDRIYY KRRSFKDRFK TLSINDDLAP IDNAKYGIQP WNHSLKFSID VKLNKSLPKD 120
  121 TLFISATFTE DSKYILLSSA TGYLVIYDIE KATSKSFKIN EKVKSIVKLY GPIGSSGYQY 180
  181 VCPMNGSFYL LNNDFELVNN AVWKIHARMI THIKICNVTE SSWFVITSGM DNFLRLSLLE 240
  241 IKNGNTFLTK LSEIKLASNC TSLNVIANGD GNGQNSFSVF LTRAEYTHIA CYSIIDAKNL 300
  301 VHSYNIALNN AEFSTYAFNI RDVMAVDYVH SNTKDTIGLS PSTMLVVATS HKPYMRLILV 360
  361 EIPMNTGHPK AMKLDKVQTY YDKILRNFAT EIYQDDFSLP ILGKLESSNG VLVGNDEGIY 420
  421 SVDLMTGDSR ILNIPGEANS LHDRIKCMDI SKDQMRMVAG TSTKSIYILN VIRNAQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted functions:

Term Confidence Notes
binding 0.365473879287901 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle