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Protein Overview: YRB30

General Information:
Name(s) found: YRB30 / YGL164C [SGD]
Description(s) found:
Found 23 descriptions.
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  • RanGTP-binding protein, inhibits RanGAP1 (Rna1p)-mediated GTP hydrolysis of RanGTP (Gsp1p); shares similarity to proteins in other fungi but not in higher eukaryotes [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 440 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IMPLink to PubMed article][ISSLink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: protein binding [IDALink to PubMed article]
    GTPase regulator activity [IDALink to PubMed article][IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEILAKAGS QAVTFAIKSG ISIASTYALK TITNFVVQIP KDDARRIDQL KFKLESRMAI  60
   61 VSSAIDLIKL VAARGNTNLQ ITLRLTKDLK EEIDRFDEKI NEMTQKVEGS RSAKTQNEAI 120
  121 KAVENYIKDL LLRIEEITPF INLSLTTSGA NLNSALPYQL SPGLLLKASD FVSENNRKYE 180
  181 KAMKSNEKGT GDKEILKVQV GPTFEVTLFS IFYNLTSENN GQSGIVWKED MKRAKARIYR 240
  241 LNSTGRKYDY FMKIEQDFND GRYHEDDDKE DTPQELAIDL NHIKKLFFSV SGKLLRLEEQ 300
  301 DSPVLVLKID RSDDKENESS EGDKGLLDDI TWYAVSGYEA IEEDEEEDEE EDEEEGKDGE 360
  361 ERKEEEEEEN KLEDKDSSIT LLEYIIRLTS LQSNDQKSIL EVSDERLSIY LNDENTNSRK 420
  421 DRISNSTIEE TEKKLKNLKL

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) GSP2 YRB30

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
    View Run RPA135 No Comments Schneider, DA, et al. (2006)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YRB30 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..216] deduced N/A No confident structure predictions are available.
    2 View Details [217..440] MSA 1.004934 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle