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Protein Overview: YGL082W

General Information:
Name(s) found: YGL082W [SGD]
Description(s) found:
Found 24 descriptions.
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  • Putative protein of unknown function; predicted prenylation/proteolysis target of Afc1p and Rce1p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YGL082W is not an essential gene [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 381 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVTFLTKNV QINGTQFKIL LQNGQGECAL IALANVLLIS PAHARYAQEI SRLVRGKETV  60
   61 TLNELVQTLA DMGVQNPNGT DVDKQQLLQI LPQLYSGLNI NPEFNGSFED GVEMSIFRLY 120
  121 NVGIVHGWII DGDNDPNSYE HVSKYSYMGA QKVLVQSYEI QKNNAQFENS EQIQSDAPYL 180
  181 KSFLARSATQ LTEYGLTHLR EILVERSYAV LFRNDHFCTL YKNNGELFTL VTDPTYRNRK 240
  241 DINWQSLKSV NGSQDSYYTG NFIPTSLERT ETTATGQNES YISNPFSDQN TGHVTSNQVN 300
  301 SGASGVQQIE DDEELARRLQ EQEDMRAANN MQNGYANNGR NHQRERFERP EKNSKKNKFL 360
  361 PFNGSNKEKK RDKLKKNCVI M

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) RVS167 YGL082W
    View Details Krogan NJ, et al. (2006) TDP1 YGL082W

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run NAF1 No Comments Hazbun TR, et al. (2003)
    View Run SEC10 No Comments De Craene, J., et al. (2006)
    View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #30 Asynchronous Prep6-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YGL082W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..287] MSA 5.011925 View MSA. No confident structure predictions are available.
    2 View Details [288..381] deduced N/A No confident structure predictions are available.
    3 View Details [277..381] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle