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Protein Overview: GEP7

General Information:
Name(s) found: GEP7 / YGL057C [SGD]
Description(s) found:
Found 31 descriptions.
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  • Protein of unknown function; null mutant exhibits a respiratory growth defect and synthetic interactions with prohibitin (phb1) and gem1; authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 287 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed articleLink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLSNVKIFR LKSHRAFRIG PMIKAVAGNL LVKRFYQPKL ERIPPASLLL KQKIRLAQNG  60
   61 STTSTENPIS FSQTMSEIFS VLQPSAPDLD EDETSGLKRD HLLTERLNNG ELGVIMNKFF 120
  121 NPSSTHNNQL IDTNILLQNF PKLSGNDLDL LDFAINEKMR GNWNDLKQDF IQLWYYKSFG 180
  181 FLGPRTQFVL TNSSPSVRSQ FLKLPFIEYN WFLLQNNKNA NILPADVQNV VKVFHLDDKR 240
  241 FTWKSIDPFS KAIISFVVFV SIYVWLDESA KQKTKELPAQ KSTVISE

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) GEP7 GIP1

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen GIC2 GEP7 1 Unpublished Fields Lab Data
    View Screen RAD6 GEP7 1 Unpublished Fields Lab Data
    View Screen GIC1 GEP7 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data GEP7 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..287] deduced N/A No confident structure predictions are available.
    2 View Details [145..287] FFAS03 1.35 Mitochondrial cytochrome c oxidase subunit IV

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • hydrogen ion transmembrane transporter activity
    		•  0.200883452155884 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  0.161136760124421 bayes_pls_golite062009
  • binding
    		•  0.118712393901925 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.105855344322413 bayes_pls_golite062009
  • cytochrome-c oxidase activity
    		•  0.104705673375264 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors
    		•  0.104705673375264 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors, oxygen as acceptor
    		•  0.104705673375264 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.65

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle