| Protein: | GEP7 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 287 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GEP7.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..287] | [1..287] |
|
Region A: Residues: [1-287] |
1 11 21 31 41 51
| | | | | |
1 MVLSNVKIFR LKSHRAFRIG PMIKAVAGNL LVKRFYQPKL ERIPPASLLL KQKIRLAQNG 60
61 STTSTENPIS FSQTMSEIFS VLQPSAPDLD EDETSGLKRD HLLTERLNNG ELGVIMNKFF 120
121 NPSSTHNNQL IDTNILLQNF PKLSGNDLDL LDFAINEKMR GNWNDLKQDF IQLWYYKSFG 180
181 FLGPRTQFVL TNSSPSVRSQ FLKLPFIEYN WFLLQNNKNA NILPADVQNV VKVFHLDDKR 240
241 FTWKSIDPFS KAIISFVVFV SIYVWLDESA KQKTKELPAQ KSTVISE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [145-287] |
1 11 21 31 41 51
| | | | | |
1 GNDLDLLDFA INEKMRGNWN DLKQDFIQLW YYKSFGFLGP RTQFVLTNSS PSVRSQFLKL 60
61 PFIEYNWFLL QNNKNANILP ADVQNVVKVF HLDDKRFTWK SIDPFSKAII SFVVFVSIYV 120
121 WLDESAKQKT KELPAQKSTV ISE
|
| Detection Method: | |
| Confidence: | 1.35 |
| Match: | 1occD |
| Description: | Mitochondrial cytochrome c oxidase subunit IV |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrogen ion transmembrane transporter activity | 0.200883452155884 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 0.161136760124421 | bayes_pls_golite062009 |
| binding | 0.118712393901925 | bayes_pls_golite062009 |
| oxidoreductase activity | 0.105855344322413 | bayes_pls_golite062009 |
| cytochrome-c oxidase activity | 0.104705673375264 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on heme group of donors | 0.104705673375264 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on heme group of donors, oxygen as acceptor | 0.104705673375264 | bayes_pls_golite062009 |
