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Protein Overview: YDR348C

General Information:
Name(s) found: YDR348C [SGD]
Description(s) found:
Found 26 descriptions.
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  • Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery and bud neck; potential Cdc28p substrate [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 499 amino acids

    Gene Ontology:
    Cellular Component: cellular bud neck [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENRNSSTSS RPFSVNNPFR NATVDSSINQ YKNDSQFQEW AKNQSRTNSF DMPQLNTRTS  60
   61 SQLSFPNIPE DEPQRNADQQ GAFYSGLESF SSGSLSPPSR PLSSKNPFLD DVSSATDFRR 120
  121 SPPPVSRNKN HPTAKEEKEQ LRQRYLEESD VSTVGNTREN TDLPPSYEEI TSTNGSRRAY 180
  181 PKEKVSRPSS HREHSNSGTY ISRRSSSHHH REASSSSTPS KKGKRKSKVI VPKNVDTIDK 240
  241 LDVTGLFGGS FHHDGPFDAV TPHRNKNNKA APVLAFPVDG PNSTIGGAST KKSALDEVFG 300
  301 RDDTDDSDIY QYSSQTLRRG GDTQDAIKAN VGNVQQMDAK NKTELVHGPV TAGLGSSTFL 360
  361 DGAPASSAAI RNDIKAHSYH NRNGGLQRNK SLSQRLGLGG SGDSNAPMTG VRRNLSLSRD 420
  421 NYDVGHSNEG VRRSKTVNSP NRTHKSNYTT DFDGQDDHNE DEEDVYLGVR YNEPNMKKKS 480
  481 TGSKLLSRVK SLKVGRKSQ

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) ASK10 ATG1 BMH2 KIC1 NTH1 PIK1 REG1 RFX1 SOG2 UBP11 YDR348C YNR014W
    View Details Gavin AC, et al. (2002) EDE1 SLA2 SYP1 YDR348C

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YDR348C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..77] deduced N/A No confident structure predictions are available.
    2 View Details [78..199] MSA 3.010972 View MSA. No confident structure predictions are available.
    3 View Details [200..406] MSA 1.006976 View MSA. No confident structure predictions are available.
    4 View Details [407..499] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle