| General Information: |
|
| Name(s) found: |
YDR261W-B
[SGD]
|
| Description(s) found:
Found 27 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 1770 amino acids |
Gene Ontology: |
|
| Cellular Component: |
retrotransposon nucleocapsid
[ISS ]
|
| Biological Process: |
transposition, RNA-mediated
[ISS]
|
| Molecular Function: |
DNA-directed DNA polymerase activity
[ISS]
RNA-directed DNA polymerase activity [ISS ]
RNA binding [ISS ]
protein binding [ISS ]
ribonuclease activity [ISS ]
peptidase activity [ISS ]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MESQQLHQNP HSLHGSAAAS VTSKEVPSNQ DPLAVSASNL PEFDRDSTKV NSQQETTPGT 60
61 SAVPENHHHV SPQPASVPPP QNGQYQQHGM MTPNKAMASN WAHYQQPSMM TCSHYQTSPA 120
121 YYQPDPHYPL PQYIPPLSTS SPDPIDSQNQ HSEVPQAKTK VRNNVLPPHT LTSEENFSTW 180
181 VKFYIRFLKN SNLGDIIPND QGEIKRQMTY EEHAYIYNTF QAFAPFHLLP TWVKQILEIN 240
241 YADILTVLCK SVSKMQTNNQ ELKDWIALAN LEYDGSTSAD TFEITVSTII QRLKENNINV 300
301 SDRLACQLIL KGLSGDFKYL RNQYRTKTNM KLSQLFAEIQ LIYDENKIMN LNKPSQYKQH 360
361 SEYKNVSRTS PNTTNTKVTS RNYHRTNSSK PRAAKAHNIA TSSKFSRVNN DHINESTVSS 420
421 QYLSDDNELS LGQQQKESKP TRTIDSNDEL PDHLLIDSGA SQTLVRSAHY LHHATPNSEI 480
481 NIVDAQKQDI PINAIGNLHF NFQNGTKTSI KALHTPNIAY DLLSLSELAN QNITACFTRN 540
541 TLERSDGTVL APIVKHGDFY WLSKKYLIPS HISKLTINNV NKSKSVNKYP YPLIHRMLGH 600
601 ANFRSIQKSL KKNAVTYLKE SDIEWSNAST YQCPDCLIGK STKHRHIKGS RLKYQESYEP 660
661 FQYLHTDIFG PVHHLPKSAP SYFISFTDEK TRFQWVYPLH DRREESILNV FTSILAFIKN 720
721 QFNARVLVIQ MDRGSEYTNK TLHKFFTNRG ITACYTTTAD SRAHGVAERL NRTLLNDCRT 780
781 LLHCSGLPNH LWFSAVEFST IIRNSLVSPK NDKSARQHAG LAGLDITTIL PFGQPVIVNN 840
841 HNPDSKIHPR GIPGYALHPS RNSYGYIIYL PSLKKTVDTT NYVILQDNQS KLDQFNYDTL 900
901 TFDDDLNRLT AHNQSFIEQN ETEQSYDQNT ESDHDYQSEI EINSDPLVND FSSQSLNPLQ 960
961 LDKEPVQKVR APKEVDADIS EYNILPSTIR SRTPHIINKE STEMGGTIES DTTSPRHSST1020
1021 FTARNQKRPG SPNDMIDLTS QDRVNYGLEN IKTTRLGGTE EPYIQRNSDT NIKYRTTNST1080
1081 PSIDDRSSNS ESTTPIISIE TKAVCDNTPS IDTDPPEYRS SDHATPNIMP DKSSKNVTAD1140
1141 SILDDLPLPD LTNKSPTDTS DVSKDIPHIH SRQTNSSLGG MDDSNVLTTT KSKKRSLEDN1200
1201 ETEIEVSRDT WNNKNMRSLE PPRSKKRINL IAAIKGVKSI KPVRTTLRYD EAITYNKDNK1260
1261 EKDRYVEAYH KEISQLLKMN TWDTNKYYDR NDIDPKKVIN SMFIFNKKRD GTHKARFVAR1320
1321 GDIQHPDTYD SDMQSNTVHH YALMTSLSIA LDNDYYITQL DISSAYLYAD IKEELYIRPP1380
1381 PHLGLNDKLL RLRKSLYGLK QSGANWYETI KSYLINCCDM QEVRGWSCVF KNSQVTICLF1440
1441 VDDMILFSKD LNANKKIITT LKKQYDTKII NLGEGDNEIQ YDILGLEIKY QRSKYMKLGM1500
1501 EKSLTEKLPK LNVPLNPKGK KLRAPGQPGH YIDQDELEID EDEYKEKVHE MQKLIGLASY1560
1561 VGYKFRFDLL YYINTLAQHI LFPSRQVLDM TYELIQFIWN TRDKQLIWHK SKPVKPTNKL1620
1621 VVISDASYGN QPYYKSQIGN IYLLNGKVIG GKSTKASLTC TSTTEAEIHA VSEAIPLLNN1680
1681 LSHLVQELNK KPIIKGLLTD SRSTISIIKS TNEEKFRNRF FGTKAMRLRD EVSGNNLYVY1740
1741 YIETKMNIAD VMTKPLPIKT FKLLTNKWIH |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | No Comments | Schneider, DA, et al. (2006) | |
| View Run | phosphorylation data - cascade search | Green EM, et al (2005) | |
| View Run | Sample 3 - cpn + atp, from june 2005 | McCusker D, et al (2007) |
SHOWING SINGLE HITS. [ Hide Single Hits ]
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| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)
