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Protein Overview: SSY1

General Information:
Name(s) found: SSY1 / YDR160W [SGD]
Description(s) found:
Found 26 descriptions.
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  • Component of the SPS plasma membrane amino acid sensor system (Ssy1p-Ptr3p-Ssy5p), which senses external amino acid concentration and transmits intracellular signals that result in regulation of expression of amino acid permease genes [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 852 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDALink to PubMed article]
    Biological Process: response to amino acid stimulus [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSVNQIYDL FPNKHNIQFT DSHSQEHDTS SSLAKNDTDG TISIPGSIDT GILKSIIEEQ  60
   61 GWNDAELYRS SIQNQRFFLT DKYTKKKHLT MEDMLSPEEE QIYQEPIQDF QTYNKRVQRE 120
  121 YELRERMEEF FRQNTKNDLH ILNEDSLNQQ YSPLGPADYV LPLDRYSRMK HIASNFFRKK 180
  181 LGIPRKLKRR SHYNPNAEGH TKGNSSILSS TTDVIDNASY RNIAIDENVD ITHKEHAIDE 240
  241 INEQGASGSE SVVEGGSLLH DIEKVFNRSR ATRKYHIQRK LKVRHIQMLS IGACFSVGLF 300
  301 LTSGKAFSIA GPFGTLLGFG LTGSIILATM LSFTELSTLI PVSSGFSGLA SRFVEDAFGF 360
  361 ALGWTYWISC MLALPAQVSS STFYLSYYNN VNISKGVTAG FITLFSAFSI VVNLLDVSIM 420
  421 GEIVYVAGIS KVIIAILMVF TMIILNAGHG NDIHEGVGFR YWDSSKSVRN LTYGLYRPTF 480
  481 DLADAGEGSK KGISGPKGRF LATASVMLIS TFAFSGVEMT FLASGEAINP RKTIPSATKR 540
  541 TFSIVLISYV FLIFSVGINI YSGDPRLLSY FPGISEKRYE AIIKGTGMDW RLRTNCRGGI 600
  601 DYRQISVGTG YSSPWVVALQ NFGLCTFASA FNAILIFFTA TAGISSLFSC SRTLYAMSVQ 660
  661 RKAPPVFEIC SKRGVPYVSV IFSSLFSVIA YIAVDQTAIE NFDVLANVSS ASTSIIWMGL 720
  721 NLSFLRFYYA LKQRKDIISR NDSSYPYKSP FQPYLAIYGL VGCSLFVIFM GYPNFIHHFW 780
  781 STKAFFSAYG GLMFFFISYT AYKVLGTSKI QRLDQLDMDS GRREMDRTDW TEHSQYLGTY 840
  841 RERAKKLVTW LI

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Qiu et al. (2008) PTR3 SSY1

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 No Comments Schneider, DA, et al. (2006)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen SEC17 SSY1 2 Unpublished Fields Lab Data
    View Screen GPI14 SSY1 2 Hazbun TR, et al. (2003)
    View Screen ILM1 SSY1 2 Lockshon D, et al. (2006)

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..231] deduced N/A No confident structure predictions are available.
    2 View Details [232..852] Pfam 68.657577 Amino acid permease No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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