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Protein Overview: ECM18

General Information:
Name(s) found: ECM18 / YDR125C [SGD]
Description(s) found:
Found 26 descriptions.
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  • Protein of unknown function, similar to Rlp24p [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 453 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article]
    Biological Process: cellular cell wall organization [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLIKRYLMD PESLRRQIMN VYKCYMWKRA FHSNRSLLEV KRREKSLQRK ILERILRPKE  60
   61 ENAVKKSGFK LWSSHLNNPH KTYMRLEELQ RRIMEEVHVE GIKKNDKLFN EINQWHFQNE 120
  121 NTSTVRTPTL LIHGYAASSM SFFRNYPGLS KHIRNLYSID MPASGLSSVP SLEINTTTPL 180
  181 PLDIKFIGEN KFKVPYTINA NHNKFVIQMY EDFYLDRIEQ WRIDNKLGKM NVVGHSFGGY 240
  241 LSFKYAVKYP NSVNKLCLVS PLGVERNIWS VNNNFHSNTL YTIDFKNPNS KFYSKRNMIP 300
  301 KYLFEQQFHI LRMMGPLGAK LCWNYIMAAY SRVPSLAYKE YIFELFYGKG GIPEVTTDIF 360
  361 KALFSRCILA KDPLMDSLQY LNVKKLLIVY GQYDWMNKKA GMFMVKELNN LKNCLEGASY 420
  421 LEIPSSGHNL FLDNPESFNQ SIVSFLSDET KSP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #11 Mitotic Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data ECM18 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..77] deduced N/A Confident ab initio structure predictions are available.
    2 View Details [78..453] PSI-BLAST 49.09691 Epoxide hydrolase, N-terminal domain; Mammalian epoxide hydrolase, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.39629727416851 bayes_pls_golite062009
  • phospholipase activity
    		•  1.05835015160042 bayes_pls_golite062009
  • lipase activity
    		•  0.849473630399459 bayes_pls_golite062009
  • carboxylesterase activity
    		•  0.424330502936163 bayes_pls_golite062009
  • binding
    		•  0.401633301499824 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.264183693934251 bayes_pls_golite062009
  • protein binding
    		•  0.0473186402188429 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle