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Protein Overview: SMP1

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen SNF4 SMP1 1 Unpublished Fields Lab Data
View Screen MDM30 SMP1 1 Unpublished Fields Lab Data

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..80] PSI-BLAST 189.616428 Mef2a core
2 View Details [81..277] MSA 18.490997 View MSA. No confident structure predictions are available.
3 View Details [278..452] deduced N/A No confident structure predictions are available.
4 View Details [348..452] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • transcription regulator activity
  • 4.47820295830817 bayes_pls_golite062009
  • DNA binding
  • 4.34885522982729 bayes_pls_golite062009
  • nucleic acid binding
  • 4.22473647889076 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 3.75742221961238 bayes_pls_golite062009
  • binding
  • 3.73009730829487 bayes_pls_golite062009
  • transcription factor activity
  • 3.68208249443337 bayes_pls_golite062009
  • transcription activator activity
  • 2.70980744336671 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 2.63280961628615 bayes_pls_golite062009
  • protein binding
  • 2.32692027935469 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
  • 0.37351258349543 bayes_pls_golite062009
  • DNA bending activity
  • 0.167327205417291 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle