YRC Logo
Descriptions Names[Advanced Search]

Protein Overview: rdx-PE

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:


[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

No microscopy data found in the PDR for this protein.

Protein Structure Data

[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..466] PSI-BLAST 4.045757 No description for 1y0fB was found.
2 View Details [467..629] PSI-BLAST 45.154902 Solution structure of N-terminal domain of speckle-type POZ protein
3 View Details [630..752] PSI-BLAST 30.0 No description for 2nn2A was found.
4 View Details [753..829] PSI-BLAST 8.0 No description for 2eqxA was found.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
Term Confidence Notes
  • ubiquitin-protein ligase activity
  • 3.89053628409867 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 3.68249288112226 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 2.77614213354896 bayes_pls_golite062009
  • binding
  • 2.72457822303946 bayes_pls_golite062009
  • protein binding
  • 1.74340583625887 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 1.37597575764906 bayes_pls_golite062009
  • transcription regulator activity
  • 1.31204855886285 bayes_pls_golite062009
  • nucleic acid binding
  • 1.07240204386411 bayes_pls_golite062009
  • DNA binding
  • 0.996677220619186 bayes_pls_golite062009
  • catalytic activity
  • 0.00622013180681097 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.

    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.73

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle