| Protein: | rdx-PE |
| Organism: | Drosophila melanogaster |
| Length: | 829 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rdx-PE.
| Description | E-value | Query Range |
Subject Range |
|
|
475.0 | [0..435] | [828..85] |
|
Region A: Residues: [1-466] |
1 11 21 31 41 51
| | | | | |
1 MFEPYVKIKK KRSVNEIYEN ENLEQQQHHL QQQQQQPATS DNCCCENGEP QNAPEVATAT 60
61 VAATSVAATS AAATVATGAA ASSSSSGNCS RLQQLISTPP VLLRRSSLQQ QQHQQQQHHP 120
121 HTPAATATPP QQQQQQQAAP SVLQQHLGHL NYESGATAAA AATAAAAAAT VATSRSGSAT 180
181 LAQHLATPSN ILQAAFGSSN LQHILTRSAP SPSSSAISSN NCSSACAGNT HYNGGNSNSG 240
241 SSSSNSNHHS NSIIASRLFG AASSSSSSSS SSASASSSSV AASSSSSSHH LHSHHSALTN 300
301 SITNRINQSI RRHLNQQQHH HPLSASSSSA SASPSASTSS SSSYQQSSVQ QQHYNCAHPA 360
361 QQQQHHHHHH SSSSSSSSSS SSSHHHHNSS SSSNSNNQQQ PQQSPLCLVL LVKCPNSKEF 420
421 CNAAANFCDK RLPVNECQAS QTARVTSNLH ASSSTMAVSR VPSPPL
|
| Detection Method: |  |
| Confidence: | 4.045757 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
|
Region A: Residues: [467-629] |
1 11 21 31 41 51
| | | | | |
1 PEVNTPVAEN WCYTQVKVVK FSYMWTINNF SFCREEMGEV LKSSTFSAGA NDKLKWCLRV 60
61 NPKGLDEESK DYLSLYLLLV SCNKSEVRAK FKFSILNAKR EETKAMESQR AYRFVQGKDW 120
121 GFKKFIRRDF LLDEANGLLP EDKLTIFCEV SVVADSVNIS GQS
|
| Detection Method: | |
| Confidence: | 45.154902 |
| Match: | 2cr2A |
| Description: | Solution structure of N-terminal domain of speckle-type POZ protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 3.89053628409867 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 3.68249288112226 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 2.77614213354896 | bayes_pls_golite062009 |
| binding | 2.72457822303946 | bayes_pls_golite062009 |
| protein binding | 1.74340583625887 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 1.37597575764906 | bayes_pls_golite062009 |
| transcription regulator activity | 1.31204855886285 | bayes_pls_golite062009 |
| nucleic acid binding | 1.07240204386411 | bayes_pls_golite062009 |
| DNA binding | 0.996677220619186 | bayes_pls_golite062009 |
| catalytic activity | 0.00622013180681097 | bayes_pls_golite062009 |
|
Region A: Residues: [630-752] |
1 11 21 31 41 51
| | | | | |
1 NIVQFKVPEC KLSEDLGNLF DNEKFSDVTL SVGGREFQAH KAILAARSDV FAAMFEHEME 60
61 ERKLNRVAIT DVDHEVLKEM LRFIYTGKAP NLEKMADDLL AAADKYALEK LKVMCEEALC 120
121 VNL
|
| Detection Method: | |
| Confidence: | 30.0 |
| Match: | 2nn2A |
| Description: | No description for 2nn2A was found. |
|
Region A: Residues: [753-829] |
1 11 21 31 41 51
| | | | | |
1 SVETAAETLI LADLHSADQL KAQTIDFINT HATDVMETSG WQNMITTHSH LIAEAFRALA 60
61 TQQIPPIGPP RKRVKMS
|
| Detection Method: | |
| Confidence: | 8.0 |
| Match: | 2eqxA |
| Description: | No description for 2eqxA was found. |
