YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|16127365, gi|...

General Information:
Name(s) found: gi|16127365 [NCBI NR]
gi|13424799 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|16127365|ref|NP_421929.1| spermidine/putrescine ABC transporter, permease protein [Caulobacter crescentus CB15] [NCBI NR]
  • gi|13424799|gb|AAK25097.1| spermidine/putrescine ABC transporter, permease protein [Caulobacter crescentus CB15] [NCBI NR]
  • spermidine/putrescine ABC transporter, permease protein [Caulobacter crescentus CB15]gi|13424799|gb|AAK25097.1| spermidine/putrescine ABC transporter, permease protein [Caulobacter crescentus CB15]gi|25399373|pir||E87637 hypothetical protein CC3135 [imp [nrdb_11152004_Chlamydomonas]
  • spermidine/putrescine ABC transporter, permease protein [Caulobacter crescentus CB15] [nr-271106-contam.fasta]
    • Organism: Caulobacter crescentus CB15
    Length: 318 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFAPLDPARW SDANGFDLGP GIRRGNRMGG GVLMAKKSAP GPLEYLRRWQ MQAWLAAVFI  60
   61 FLYAPLIALM AFSFNDSKRN IVWKGFTLKY YEKLFNNSEL LEAFGNSLTI AAASTVISLF 120
  121 LGAAVALALW RFRFPGKTAV DGAMALPIVV PEICMGVAML VFFAKVLPWP QGMPWPLNLG 180
  181 AIIIAHVSFS FPFVAVVVRA RMASFNREME EAARDLGAGE FRTIKDVILP HMAPSLIAGA 240
  241 LLAFTLSLDD FVITFFTAGP DTVTFPVKVY SMVRFSVTPE VNAASTVLIV LTVLLTAAAL 300
  301 KLQGNPAAAA GHGAKDGK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..83] deduced N/A No confident structure predictions are available.
    2 View Details [84..318] PSI-BLAST 24.0 No description for 2onkC was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transporter activity
    		•  4.47791794099048 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  4.39634414867723 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  3.89128503869358 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  3.78071702105421 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  3.78024819585319 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  3.76710689838502 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  3.76710689838502 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  3.76480875126102 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.65928254714629 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.61840729006809 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  3.13976951511862 bayes_pls_golite062009
  • ATPase activity
    		•  2.90304684848114 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  2.85886572725081 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  2.78799656158331 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  2.76854894183109 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  2.76635806953632 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.42886654788147 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.54974155411368 bayes_pls_golite062009
  • hydrolase activity
    		•  1.52360037846731 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  1.35745015743741 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  0.96228415837358 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  0.86220210518613 bayes_pls_golite062009
  • carboxylic acid transmembrane transporter activity
    		•  0.851725653994868 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
    		•  0.69074662322395 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.483541714040201 bayes_pls_golite062009
  • symporter activity
    		•  0.483541714040201 bayes_pls_golite062009
  • catalytic activity
    		•  0.427775057748038 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  0.18066368771781 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  0.149318428666465 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  0.0202682073710961 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle