YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: pdfr-PA

General Information:
Name(s) found: pdfr-PA / FBpp0099841 [FlyBase]
Description(s) found:
Found 21 descriptions.
SHOW ALL
  • The gene PDF receptor is referred to in FlyBase by the symbol Dmel\pdfr (CG13758, FBgn0260753). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:2448136..2471044. It has the cytological map location 3A4-3A6. There is experimental evidence that it has the molecular function</span>: G-protein coupled receptor activity; neuropeptide receptor activity. There is experimental evidence that it is involved in the biological process</span>: neuropeptide signaling pathway; circadian rhythm; circadian behavior; regulation of circadian sleep/wake cycle; gravitaxis. 16 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 669 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    integral to membrane [IC][ISS]
    neuronal cell body [IDA]
    neuron projection [IDA]
    Biological Process: neuropeptide signaling pathway [IDA]
    G-protein coupled receptor protein signaling pathway [IC][ISS]
    regulation of circadian sleep/wake cycle [IMP]
    cell surface receptor linked signaling pathway [IEA]
    gravitaxis [IDA][NAS]
    circadian behavior [IDA][IMP]
    circadian rhythm [IDA][IMP]
    Molecular Function: G-protein coupled receptor activity [IDA][ISS]
    neuropeptide receptor activity [IPI][ISS]
    calcitonin receptor activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLLSNILDC GGCISAQRFT RLLRQSGSSG PSPSAPTAGT FESKSMLEPT SSHSLATGRV  60
   61 PLLHDFDAST TESPGTYVLD GVARVAQLAL EPTVMDALPD SDTEQVLGNL NSSAPWNLTL 120
  121 ASAAATNFEN CSALFVNYTL PQTGLYCNWT WDTLLCWPPT PAGVLARMNC PGGFHGVDTR 180
  181 KFAIRKCELD GRWGSRPNAT EVNPPGWTDY GPCYKPEIIR LMQQMGSKDF DAYIDIARRT 240
  241 RTLEIVGLCL SLFALIVSLL IFCTFRSLRN NRTKIHKNLF VAMVLQVIIR LTLYLDQFRR 300
  301 GNKEAATNTS LSVIENTPYL CEASYVLLEY ARTAMFMWMF IEGLYLHNMV TVAVFQGSFP 360
  361 LKFFSRLGWC VPILMTTVWA RCTVMYMDTS LGECLWNYNL TPYYWILEGP RLAVILLNFC 420
  421 FLVNIIRVLV MKLRQSQASD IEQTRKAVRA AIVLLPLLGI TNLLHQLAPL KTATNFAVWS 480
  481 YGTHFLTSFQ GFFIALIYCF LNGEVRAVLL KSLATQLSVR GHPEWAPKRA SMYSGAYNTA 540
  541 PDTDAVQPAG DPSATGKRIS PPNKRLNGRK PSSASIVMIH EPQQRQRLMP RLQNKAREKG 600
  601 KDRVEKTDAE AEPDPTISHI HSKEAGSARS RTRGSKWIMG ICFRGQKVLR VPSASSVPPE 660
  661 SVVFELSEQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..213] PSI-BLAST 15.221849 No description for 2pzxA was found.
    2 View Details [214..529] PSI-BLAST 45.09691 Rhodopsin
    3 View Details [530..669] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • G-protein coupled receptor activity
    		•  7.48253527316663 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  5.76968261800439 bayes_pls_golite062009
  • receptor activity
    		•  5.47976284348283 bayes_pls_golite062009
  • signal transducer activity
    		•  4.51388461085202 bayes_pls_golite062009
  • molecular transducer activity
    		•  4.51388461085202 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle