| Protein: | pdfr-PA |
| Organism: | Drosophila melanogaster |
| Length: | 669 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pdfr-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
359.0 | [0..1] | [647..70] |
|
Region A: Residues: [1-213] |
1 11 21 31 41 51
| | | | | |
1 MTLLSNILDC GGCISAQRFT RLLRQSGSSG PSPSAPTAGT FESKSMLEPT SSHSLATGRV 60
61 PLLHDFDAST TESPGTYVLD GVARVAQLAL EPTVMDALPD SDTEQVLGNL NSSAPWNLTL 120
121 ASAAATNFEN CSALFVNYTL PQTGLYCNWT WDTLLCWPPT PAGVLARMNC PGGFHGVDTR 180
181 KFAIRKCELD GRWGSRPNAT EVNPPGWTDY GPC
|
| Detection Method: |  |
| Confidence: | 15.221849 |
| Match: | 2pzxA |
| Description: | No description for 2pzxA was found. |
| Term | Confidence | Notes |
| G-protein coupled receptor activity | 7.48253527316663 | bayes_pls_golite062009 |
| transmembrane receptor activity | 5.76968261800439 | bayes_pls_golite062009 |
| receptor activity | 5.47976284348283 | bayes_pls_golite062009 |
| signal transducer activity | 4.51388461085202 | bayes_pls_golite062009 |
| molecular transducer activity | 4.51388461085202 | bayes_pls_golite062009 |
|
Region A: Residues: [214-529] |
1 11 21 31 41 51
| | | | | |
1 YKPEIIRLMQ QMGSKDFDAY IDIARRTRTL EIVGLCLSLF ALIVSLLIFC TFRSLRNNRT 60
61 KIHKNLFVAM VLQVIIRLTL YLDQFRRGNK EAATNTSLSV IENTPYLCEA SYVLLEYART 120
121 AMFMWMFIEG LYLHNMVTVA VFQGSFPLKF FSRLGWCVPI LMTTVWARCT VMYMDTSLGE 180
181 CLWNYNLTPY YWILEGPRLA VILLNFCFLV NIIRVLVMKL RQSQASDIEQ TRKAVRAAIV 240
241 LLPLLGITNL LHQLAPLKTA TNFAVWSYGT HFLTSFQGFF IALIYCFLNG EVRAVLLKSL 300
301 ATQLSVRGHP EWAPKR
|
| Detection Method: | |
| Confidence: | 45.09691 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [530-669] |
1 11 21 31 41 51
| | | | | |
1 ASMYSGAYNT APDTDAVQPA GDPSATGKRI SPPNKRLNGR KPSSASIVMI HEPQQRQRLM 60
61 PRLQNKAREK GKDRVEKTDA EAEPDPTISH IHSKEAGSAR SRTRGSKWIM GICFRGQKVL 120
121 RVPSASSVPP ESVVFELSEQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
