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Protein Overview: gi|20466614, gi|...

General Information:
Name(s) found: gi|34098813 [NCBI NR]
gi|22329895 [NCBI NR]
gi|20466614 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|34098813|gb|AAQ56789.1| At1g31540 [Arabidopsis thaliana] [NCBI NR]
  • gi|22329895|ref|NP_174439.2| disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] [NCBI NR]
  • gi|20466614|gb|AAM20624.1| disease resistance gene, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 776 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    apoptosis [IEA]
    Molecular Function: nucleotide binding [IEA]
    ATP binding [IEA]
    transmembrane receptor activity [IEA]
    nucleoside-triphosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSSSHNW LYDVFLSFRG EDVRVTFRSH FLKELDRKLI TAFRDNEIER SHSLWPDLEQ  60
   61 AIKESRIAVV VFSKNYASSS WCLNELLEIV NCNDKIVIPV FYHVDPSQVR HQIGDFGKIF 120
  121 ENTCKRQTDE EVKNQWKKAL TLVANMLGFD SAKWNDEAKM IEEIANDVLG KLLLTTPKDS 180
  181 EELVGIEDHI AEMSLLLQLE SKEVRMVGIS GSSGIGKTTI ARALFKRLSR HFQGSTFIDR 240
  241 AFVSYSRNIY SGANPDDPNM KLQLQGHFLS EILGKKDIKI DDPAALEERL KHQKVLIIID 300
  301 DLDDIMVLDT LVGQTQWFGY GSRIIVVTND KHFLIAHGID HIYEVSFPTD VHACQMLCQS 360
  361 AFKQNYAPKG FEDLVVDVVR HAGNFPLGLN LLGKYLRRRD MEYWMDMLPR LENSLRIDGK 420
  421 IEKILRISYD GLESEDQEIF RHIACLFNHM EVTTIKSLLA DSDVSFALEN LADKSLIHVR 480
  481 QGYVVMHRSL QEMGRKIVRI QSIDKPGERE FLVDPNDIHD ILNACTGTQK VLGISLDIRN 540
  541 IRELDVHERA FKGMSNLRFL EIKNFGLKED GLHLPPSFDY LPRTLKLLCW SKFPMRCMPF 600
  601 GFRPENLVKL EMQYSKLHKL WEGVAPLTCL KEMDLHGSSN LKVIPDLSEA TNLEILNLKF 660
  661 CESLVELPSS IRNLNKLLNL DMLNCKSLKI LPTGFNLKSL DRLNLYHCSK LKTFPKFSTN 720
  721 ISVLNLNLTN IEDFPSNLHL ENLVEFRISK EESDEKQWEE EKVSSSTLNI ISKLFP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..144] FFAS03 4.31 Toll-like receptor 2, TLR2
    2 View Details [145..565] PSI-BLAST 9.522879 Structure of the apoptotic protease-activating factor 1 bound to ADP
    3 View Details [566..776] PSI-BLAST 6.69897 No description for 2z7xA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.166909062418251 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle