| Protein: | gi|20466614, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 776 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20466614, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
445.0 | [0..1] | [765..1] |
|
Region A: Residues: [1-144] |
1 11 21 31 41 51
| | | | | |
1 MASSSSSHNW LYDVFLSFRG EDVRVTFRSH FLKELDRKLI TAFRDNEIER SHSLWPDLEQ 60
61 AIKESRIAVV VFSKNYASSS WCLNELLEIV NCNDKIVIPV FYHVDPSQVR HQIGDFGKIF 120
121 ENTCKRQTDE EVKNQWKKAL TLVA
|
| Detection Method: |  |
| Confidence: | 4.31 |
| Match: | 1fywA |
| Description: | Toll-like receptor 2, TLR2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.166909062418251 | bayes_pls_golite062009 |
|
Region A: Residues: [145-565] |
1 11 21 31 41 51
| | | | | |
1 NMLGFDSAKW NDEAKMIEEI ANDVLGKLLL TTPKDSEELV GIEDHIAEMS LLLQLESKEV 60
61 RMVGISGSSG IGKTTIARAL FKRLSRHFQG STFIDRAFVS YSRNIYSGAN PDDPNMKLQL 120
121 QGHFLSEILG KKDIKIDDPA ALEERLKHQK VLIIIDDLDD IMVLDTLVGQ TQWFGYGSRI 180
181 IVVTNDKHFL IAHGIDHIYE VSFPTDVHAC QMLCQSAFKQ NYAPKGFEDL VVDVVRHAGN 240
241 FPLGLNLLGK YLRRRDMEYW MDMLPRLENS LRIDGKIEKI LRISYDGLES EDQEIFRHIA 300
301 CLFNHMEVTT IKSLLADSDV SFALENLADK SLIHVRQGYV VMHRSLQEMG RKIVRIQSID 360
361 KPGEREFLVD PNDIHDILNA CTGTQKVLGI SLDIRNIREL DVHERAFKGM SNLRFLEIKN 420
421 F
|
| Detection Method: | |
| Confidence: | 9.522879 |
| Match: | 1z6tA |
| Description: | Structure of the apoptotic protease-activating factor 1 bound to ADP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [566-776] |
1 11 21 31 41 51
| | | | | |
1 GLKEDGLHLP PSFDYLPRTL KLLCWSKFPM RCMPFGFRPE NLVKLEMQYS KLHKLWEGVA 60
61 PLTCLKEMDL HGSSNLKVIP DLSEATNLEI LNLKFCESLV ELPSSIRNLN KLLNLDMLNC 120
121 KSLKILPTGF NLKSLDRLNL YHCSKLKTFP KFSTNISVLN LNLTNIEDFP SNLHLENLVE 180
181 FRISKEESDE KQWEEEKVSS STLNIISKLF P
|
| Detection Method: | |
| Confidence: | 6.69897 |
| Match: | 2z7xA |
| Description: | No description for 2z7xA was found. |
