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Protein Overview: gi|30257265, gi|...

General Information:
Name(s) found: gi|30262633 [NCBI NR]
gi|30257265 [NCBI NR]
Description(s) found:
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  • gi|30262633|ref|NP_845010.1| penicillin-binding protein [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30257265|gb|AAP26496.1| penicillin-binding protein [Bacillus anthracis str. Ames] [NCBI NR]
  • penicillin-binding protein [Bacillus anthracis str. Sterne]gi|47527940|ref|YP_019289.1| penicillin-binding protein [Bacillus anthracis str. 'Ames Ancestor']gi|30262633|ref|NP_845010.1| penicillin-binding protein [Bacillus anthracis str. Ames]gi|3025726 [nrdb_11152004_Chlamydomonas]
  • penicillin-binding protein [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 712 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: peptidoglycan biosynthetic process [ISSLink to PubMed article]
    Molecular Function: penicillin binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKLQTNKGA RYFMIAFIVL FLIMLLRFFY IQAVGVVHNV NVKDLATEQH NKNGILEANR  60
   61 GTIYDQAGKV LVQDSTTYRV VVNLKGNGKL KNKDETAAQL ADALEINKED VLKNFHEGRT 120
  121 QVEIGKVGRN LTREKKEQIR KLKIPGVSFM PEKARVYPNE DFASYILGFA RPDDKGNTEG 180
  181 KFGLEKSLDK YLRSTNGNIE YVGGRGGIPL TNDIGKIEPA KHGNNVYLTL DKQINSFLEE 240
  241 AMNKAQDHYD PSMLLGIIAD PKTGKVLAMS SKPSFNPNKG DIEYFLNDPI ANAYEPGSTM 300
  301 KVFTLAAAIN EGVYNGKEYF QSGKYAVGSS DIKDHNGGFG WGSITFDEGF ERSSNVAFSI 360
  361 LEDQLLKPNK FKQYMNKFGF NQKTGIDLPG ESKNTLLLNT QIQQVTTSFG QGSTVTPIQL 420
  421 IQAATAIAND GKMMQPYIVD KVVNPTNKQV IMENQPKEIG NPIKKETADK VRDLMERVIT 480
  481 SSKGTGTMYK VDGYPIGGKT GTAQIPNPEN GRYMEGKENY IFSFLGMAPI DDPELIVYLA 540
  541 IKQPKLKGDE YGAQPLAEIF KPVVKNSLEY LKVRPYTEKQ MADATEKSQL KVQNYVNQSM 600
  601 GTVENNVKKE KLQPITLGEG KIIKQYPQSG EVMSEGDRIF LLGKNATMPN LQGWSMRDVM 660
  661 YFSKLLKLDL KTSGTGYVTS QSIKKGQAIQ EGDVLELELE PPLQPLTEAN TN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..712] PSI-BLAST 125.0 PBP2x from Streptococcus pneumoniae strain 5259 with reduced susceptibility to beta-lactam antibiotics

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • drug binding
    		•  3.43867028493374 bayes_pls_golite062009
  • serine-type D-Ala-D-Ala carboxypeptidase activity
    		•  3.12650314537616 bayes_pls_golite062009
  • penicillin binding
    		•  2.89507018520983 bayes_pls_golite062009
  • serine-type carboxypeptidase activity
    		•  2.70174066798582 bayes_pls_golite062009
  • serine-type exopeptidase activity
    		•  2.69091897402517 bayes_pls_golite062009
  • carboxypeptidase activity
    		•  1.96547160092829 bayes_pls_golite062009
  • hydrolase activity
    		•  1.90776959475284 bayes_pls_golite062009
  • catalytic activity
    		•  1.85492008367309 bayes_pls_golite062009
  • peptidase activity
    		•  1.51270018803999 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  1.27480861613963 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
    		•  1.13698125224034 bayes_pls_golite062009
  • binding
    		•  1.11566650386305 bayes_pls_golite062009
  • serine hydrolase activity
    		•  0.402878339821269 bayes_pls_golite062009
  • serine-type peptidase activity
    		•  0.392678049813626 bayes_pls_golite062009
  • exopeptidase activity
    		•  0.150639262435765 bayes_pls_golite062009
  • protein binding
    		•  0.0666688846338231 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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