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Protein Overview: gi|30257254, gi|...

General Information:
Name(s) found: gi|30262622 [NCBI NR]
gi|30257254 [NCBI NR]
Description(s) found:
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  • gi|30262622|ref|NP_844999.1| penicillin-binding protein [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30257254|gb|AAP26485.1| penicillin-binding protein [Bacillus anthracis str. Ames] [NCBI NR]
  • penicillin-binding protein [Bacillus anthracis str. Sterne]gi|47778072|ref|YP_019278.2| penicillin-binding protein [Bacillus anthracis str. 'Ames Ancestor']gi|30262622|ref|NP_844999.1| penicillin-binding protein [Bacillus anthracis str. Ames]gi|3025725 [nrdb_11152004_Chlamydomonas]
  • penicillin-binding protein [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 708 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: peptidoglycan biosynthetic process [ISSLink to PubMed article]
    Molecular Function: penicillin binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKQEKKSGR AVTMRLNILF FCVFILFSAM IIQLGKVQII DGETYKNEVE KRENATVSLS  60
   61 VPRGKIFDRE GNPVVDNKSL RTITYTKMKG VKSEEILKTA RQLADIIEIP QEDIDKLTET 120
  121 DKKDFWMQLN PTLTEKLVSK KEINKFRDKD ITGKNLDKKI EELKRKRVTD KNLQDLTDKD 180
  181 IKVLAIKSKM TSGYQMAPQI IKKDVSEKEF TIISEGLANL PGVDVSVDWE RVYVNDGLFR 240
  241 SVLGNVSNSD EGLPSERLDY YLVRDYSRND RVGKSYIEQQ YEDVLHGTKK EVRSVADKQG 300
  301 TTIRTETISE GKSGKNLTLT IDMELQKKVE ESIEKILKAY KGSESMLDRA FVVMMNPKNG 360
  361 QVLSMAGKRL VEKDGKTEIE DYALGTMTSS YELGSTVKGA TVLTGFETKA ITPGTYFYDA 420
  421 PMKFKGTREK KSWKEFGNID DLRALQVSSN VYMFHTALKI AGVDYVRNSS LNIKQEYFDK 480
  481 MRYYFRQFGL GVPTGIDLPN ETAGQIGKKD NQPGFLLDYS IGQYDTYTPL QLVQYISTIA 540
  541 NGGYRMKPQI VQEVREQTSQ KDEIGKVVHA VEPIVLNKVD MKEEYIKQVK EGFRKVFQDG 600
  601 DGTGVRAFQK ASYKPAGKTG TAQTVYGGES DIGRNEKGER RECYNLTLAG YAPYDNPEVA 660
  661 FSVVVPWVMN DKSGINSDIG KEVLDAYFEL KNKRLTGETL QKDSSQEG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..708] PSI-BLAST 95.09691 Penicillin-binding protein 2x (pbp-2x), c-terminal domain; Penicillin-binding protein 2x (pbp-2x), N-terminal domain; Penicillin-binding protein 2x (pbp-2x), transpeptidase domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • serine-type D-Ala-D-Ala carboxypeptidase activity
    		•  3.12650314537616 bayes_pls_golite062009
  • penicillin binding
    		•  2.89507018520983 bayes_pls_golite062009
  • drug binding
    		•  2.8584507881707 bayes_pls_golite062009
  • serine-type carboxypeptidase activity
    		•  2.70174066798582 bayes_pls_golite062009
  • serine-type exopeptidase activity
    		•  2.69091897402517 bayes_pls_golite062009
  • carboxypeptidase activity
    		•  1.96547160092829 bayes_pls_golite062009
  • hydrolase activity
    		•  1.90776959475284 bayes_pls_golite062009
  • catalytic activity
    		•  1.85492008367309 bayes_pls_golite062009
  • peptidase activity
    		•  1.51270018803999 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  1.27480861613963 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
    		•  1.13698125224034 bayes_pls_golite062009
  • binding
    		•  1.11566650386305 bayes_pls_golite062009
  • serine hydrolase activity
    		•  0.402878339821269 bayes_pls_golite062009
  • serine-type peptidase activity
    		•  0.392678049813626 bayes_pls_golite062009
  • exopeptidase activity
    		•  0.150639262435765 bayes_pls_golite062009
  • protein binding
    		•  0.0666688846338231 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle