YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|49178177, gi|...

General Information:
Name(s) found: gi|49184250 [NCBI NR]
gi|49178177 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|49184250|ref|YP_027502.1| sodium transporter family protein [Bacillus anthracis str. Sterne] [NCBI NR]
  • gi|49178177|gb|AAT53553.1| sodium transporter family protein [Bacillus anthracis str. Sterne] [NCBI NR]
  • sodium transporter family protein [Bacillus anthracis str. Sterne]gi|47526600|ref|YP_017949.1| sodium transporter family protein [Bacillus anthracis str. 'Ames Ancestor']gi|30261421|ref|NP_843798.1| sodium transporter family protein [Bacillus anthracis [nrdb_11152004_Chlamydomonas]
  • sodium transporter family protein [Bacillus anthracis str. Sterne] [EBI-IPI_mouse_3.06_05-10-2005_origrev_con.fasta]
  • unnamed protein product [Bacillus anthracis str. Sterne] [NCBI_RefSeq_b_anthracis_V1_05-15-2012_reversed.fasta]
    • Organism: Bacillus anthracis str. Sterne
    Length: 449 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDIKKFLQK LRPVQLIVLF YLLAVVVSVI LLSLPFVTKS GVKWTFIDAL FTSVSVVSVT  60
   61 GLSVVTISDT FTTAGIIILA LILQLGGLGI MALGTFVWII TGKKIGLQRR RLIMADHNQG 120
  121 NLSGLVELMR SILIVIISIE LIGAILLGTR FLLYFPTWQE AYFHGFFAAV SATTNGGFDL 180
  181 TGQSLIPYKK DYIVQMIHML LIILGAIGFP VLMEVKQFLS KRGQQLFRFS LFTKLTTTTF 240
  241 FALVVVGTIM IFLLERNHFL VGKSWHETVF YTLFQSVTTR SGGLATMDIL ELSQPTLLFM 300
  301 SILMFIGASP SSVGGGIRTT TFAVSILSLY TFARGGRTVR VFKRQIHEED VLKASVVMTM 360
  361 GILLCATALF ILSITENVPL MSLIVEVCSA FGTTGLSTGI TPDLTTVGKL VLIVLMFIGR 420
  421 VGILTFILAS GGREQPPRYK YPKERIIIG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..225] MSA 3.400986 View MSA. No confident structure predictions are available.
    2 View Details [226..449] FFAS03 0.969 Intermediate gating structure 1 of the inwardly rectifying K+ channel KirBac3.1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • potassium channel activity
    		•  3.99407337282834 bayes_pls_golite062009
  • voltage-gated potassium channel activity
    		•  3.91073248991201 bayes_pls_golite062009
  • voltage-gated cation channel activity
    		•  3.77922383565762 bayes_pls_golite062009
  • voltage-gated ion channel activity
    		•  3.67556652361095 bayes_pls_golite062009
  • voltage-gated channel activity
    		•  3.66476584559855 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  3.06020723789016 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  2.8177667975893 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.77861584057135 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.55687545340392 bayes_pls_golite062009
  • cation channel activity
    		•  2.00851920503891 bayes_pls_golite062009
  • inward rectifier potassium channel activity
    		•  1.84105357682135 bayes_pls_golite062009
  • ion channel activity
    		•  1.48267500978135 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  1.38959552955997 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  1.38552473022796 bayes_pls_golite062009
  • channel activity
    		•  1.38552473022796 bayes_pls_golite062009
  • gated channel activity
    		•  1.38417227760594 bayes_pls_golite062009
  • transporter activity
    		•  1.2272927234572 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.08210454998006 bayes_pls_golite062009
  • binding
    		•  0.800792616749565 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.778889998230651 bayes_pls_golite062009
  • G-protein activated inward rectifier potassium channel activity
    		•  0.716251734128359 bayes_pls_golite062009
  • protein binding
    		•  0.363226530477833 bayes_pls_golite062009
  • ATP-activated inward rectifier potassium channel activity
    		•  0.212285519079815 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle