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Protein Overview: gi|30254719, gi|...

General Information:
Name(s) found: gi|30261105 [NCBI NR]
gi|30254719 [NCBI NR]
Description(s) found:
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  • gi|30261105|ref|NP_843482.1| S-layer protein, putative [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30254719|gb|AAP24968.1| S-layer protein, putative [Bacillus anthracis str. Ames] [NCBI NR]
  • S-layer protein, putative [Bacillus anthracis str. Sterne]gi|47526261|ref|YP_017610.1| S-layer protein, putative [Bacillus anthracis str. 'Ames Ancestor']gi|30261105|ref|NP_843482.1| S-layer protein, putative [Bacillus anthracis str. Ames]gi|30254719|g [nrdb_11152004_Chlamydomonas]
  • S-layer protein, putative [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 577 amino acids

    Gene Ontology:
    Cellular Component: S-layer [ISSLink to PubMed article]
    Biological Process: peptidoglycan-based cell wall biogenesis [ISSLink to PubMed article]
    Molecular Function: structural constituent of cell wall [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYTKLLKSIT SLSLIGGALL YTNGSDVRAA EASIFSDVPT SHWSYPAIKD LSSKNIISGY  60
   61 GNGKFGFGDV ATREQVAALI YRALLPNKQG GTFSNEGARY VLKDGSTLNN PYRDIRAGST 120
  121 LFPEEVLTLT KLGIFNGDGN GGFRPKDSVS RAEMAQIIKN AFQVSAKQKH TFNDVPNGFW 180
  181 AEGAISAVQS NGIASGTGDG KFEPAKTVTR EQYAQFLYNA LQYKKPAVAV QDTGDAALLA 240
  241 AFKDEVQKRI NTYETNITLP YKTTNSNTKE VMNTLFNAYK EVASKNEYTN NRSNVSYGLS 300
  301 GSPGNYTFTL KITYRETKEQ TEYVMKQAKA IVSSITQVGM DDHEKVKAIH DYVVKHISYD 360
  361 TSYKAYTAYE ALVNRSAVCQ GYALLTYQLL KEAGIENHFV VGTGDGQPHA WNLVKIENKW 420
  421 YHLDTTFDDP VPDEQGRVTY SYFNLSDEQI ARNHEWNRGD YPQATTNYYS TLTNKIAAGS 480
  481 TKTPAYQQIL KDTKLNYLGN EYIANNYNEF KNKMQQRYNE KSPKIEILYK QSMDGALQDV 540
  541 KKVIGEIGYP QGANRVSYKA EPYNAKEGYS LVTITFM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..178] MSA 45.358995 View MSA. No confident structure predictions are available.
    2 View Details [179..263] deduced N/A No confident structure predictions are available.
    3 View Details [264..577] PSI-BLAST 20.69897 Structure of a peptide:N-glycanase-Rad23 complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • peptidase activity
    		•  2.2242472225035 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  2.13776795126944 bayes_pls_golite062009
  • hydrolase activity
    		•  1.85753512485861 bayes_pls_golite062009
  • cysteine-type peptidase activity
    		•  1.5672054177636 bayes_pls_golite062009
  • endopeptidase activity
    		•  1.34673254944428 bayes_pls_golite062009
  • catalytic activity
    		•  1.05972260874031 bayes_pls_golite062009
  • protein binding
    		•  0.642785643976443 bayes_pls_golite062009
  • binding
    		•  0.586727415287325 bayes_pls_golite062009
  • small conjugating protein-specific protease activity
    		•  0.325102934316773 bayes_pls_golite062009
  • cysteine-type endopeptidase activity
    		•  0.25059765972312 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle