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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30254719, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYTKLLKSIT SLSLIGGALL YTNGSDVRAA EASIFSDVPT SHWSYPAIKD LSSKNIISGY  60
   61 GNGKFGFGDV ATREQVAALI YRALLPNKQG GTFSNEGARY VLKDGSTLNN PYRDIRAGST 120
  121 LFPEEVLTLT KLGIFNGDGN GGFRPKDSVS RAEMAQIIKN AFQVSAKQKH TFNDVPNGFW 180
  181 AEGAISAVQS NGIASGTGDG KFEPAKTVTR EQYAQFLYNA LQYKKPAVAV QDTGDAALLA 240
  241 AFKDEVQKRI NTYETNITLP YKTTNSNTKE VMNTLFNAYK EVASKNEYTN NRSNVSYGLS 300
  301 GSPGNYTFTL KITYRETKEQ TEYVMKQAKA IVSSITQVGM DDHEKVKAIH DYVVKHISYD 360
  361 TSYKAYTAYE ALVNRSAVCQ GYALLTYQLL KEAGIENHFV VGTGDGQPHA WNLVKIENKW 420
  421 YHLDTTFDDP VPDEQGRVTY SYFNLSDEQI ARNHEWNRGD YPQATTNYYS TLTNKIAAGS 480
  481 TKTPAYQQIL KDTKLNYLGN EYIANNYNEF KNKMQQRYNE KSPKIEILYK QSMDGALQDV 540
  541 KKVIGEIGYP QGANRVSYKA EPYNAKEGYS LVTITFM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle