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View Structure Prediction Details

Protein: gi|30254719, gi|...
Organism: Bacillus anthracis str. Ames
Length: 577 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30254719, gi|....

Description E-value Query
Range
Subject
Range
gi|65318384 - gi|65318384|ref|ZP_00391343.1| COG5279: Uncharacterized protein involved in cytokinesis, contains TG...
0.0 [1..577] [6..582]
gi|30019146, gi|... - gi|30019146|ref|NP_830777.1| S-layer-like domain-containing protein [Bacillus cereus ATCC 14579], gi...
0.0 [1..576] [1..575]
gi|42780148, gi|... - gi|42780148|ref|NP_977395.1| S-layer protein, putative [Bacillus cereus ATCC 10987], gi|42736066|gb|...
0.0 [1..577] [1..578]
gi|52144341, gi|... - gi|52144341|ref|YP_082487.1| S-layer protein [Bacillus cereus E33L], gi|51977810|gb|AAU19360.1| S-la...
0.0 [1..577] [1..578]
gi|49331746, gi|... - gi|49480190|ref|YP_035240.1| S-layer protein [Bacillus thuringiensis serovar konkukian str. 97-27], ...
0.0 [1..577] [1..578]
gi|47564942, gi|... - gi|47564942|ref|ZP_00235986.1| S-layer homology domain [Bacillus cereus G9241], gi|47558315|gb|EAL16...
0.0 [1..576] [1..577]
gi|75759931, gi|... - gi|75759931|ref|ZP_00740001.1| S-layer protein / Peptidoglycan endo-beta-N-acetylglucosaminidase [Ba...
0.0 [1..566] [6..570]
gi|89148837, gi|... - gi|89203123|ref|ZP_01181819.1| S-layer-like region [Bacillus cereus subsp. cytotoxis NVH 391-98], gi...
6.0E-81 [101..576] [6..487]
gi|89154793, gi|... - gi|89207222|ref|ZP_01185767.1| Transglutaminase-like [Bacillus weihenstephanensis KBAB4], gi|8915479...
8.0E-80 [188..577] [1..391]

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Predicted Domain #1
Region A:
Residues: [1-178]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYTKLLKSIT SLSLIGGALL YTNGSDVRAA EASIFSDVPT SHWSYPAIKD LSSKNIISGY  60
   61 GNGKFGFGDV ATREQVAALI YRALLPNKQG GTFSNEGARY VLKDGSTLNN PYRDIRAGST 120
  121 LFPEEVLTLT KLGIFNGDGN GGFRPKDSVS RAEMAQIIKN AFQVSAKQKH TFNDVPNG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [179-263]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FWAEGAISAV QSNGIASGTG DGKFEPAKTV TREQYAQFLY NALQYKKPAV AVQDTGDAAL  60
   61 LAAFKDEVQK RINTYETNIT LPYKT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [264-577]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TNSNTKEVMN TLFNAYKEVA SKNEYTNNRS NVSYGLSGSP GNYTFTLKIT YRETKEQTEY  60
   61 VMKQAKAIVS SITQVGMDDH EKVKAIHDYV VKHISYDTSY KAYTAYEALV NRSAVCQGYA 120
  121 LLTYQLLKEA GIENHFVVGT GDGQPHAWNL VKIENKWYHL DTTFDDPVPD EQGRVTYSYF 180
  181 NLSDEQIARN HEWNRGDYPQ ATTNYYSTLT NKIAAGSTKT PAYQQILKDT KLNYLGNEYI 240
  241 ANNYNEFKNK MQQRYNEKSP KIEILYKQSM DGALQDVKKV IGEIGYPQGA NRVSYKAEPY 300
  301 NAKEGYSLVT ITFM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.69897
Match: 1x3wA
Description: Structure of a peptide:N-glycanase-Rad23 complex
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peptidase activity 2.2242472225035 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.13776795126944 bayes_pls_golite062009
hydrolase activity 1.85753512485861 bayes_pls_golite062009
cysteine-type peptidase activity 1.5672054177636 bayes_pls_golite062009
endopeptidase activity 1.34673254944428 bayes_pls_golite062009
catalytic activity 1.05972260874031 bayes_pls_golite062009
protein binding 0.642785643976443 bayes_pls_golite062009
binding 0.586727415287325 bayes_pls_golite062009
small conjugating protein-specific protease activity 0.325102934316773 bayes_pls_golite062009
cysteine-type endopeptidase activity 0.25059765972312 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle