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Protein Overview: gi|24376049, gi|...

General Information:
Name(s) found: gi|24376049 [NCBI NR]
gi|24351061 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24376049|ref|NP_720092.1| O-succinylbenzoic acid--CoA ligase, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24351061|gb|AAN57536.1|AE015889_10 O-succinylbenzoic acid--CoA ligase, putative [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 464 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: menaquinone biosynthetic process [ISSLink to PubMed article]
    Molecular Function: o-succinylbenzoate-CoA ligase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRISPLHSAA LTFPEQTAVK CNGQDISYAS LSQMVLGLGE QLTRIGIRQG QPLACISRNN  60
   61 LEMICLYWAC IDIGAIFFPI SPRFPLAQVQ GLIDSHQIPC YWSETELGLT GCTQLSLDVA 120
  121 QISTTPAKTV DIQRPCNVIL TSGSSGFPKA AVHNLANHIA NAEGARSLIP LIKGDAWLLS 180
  181 LPLFHIGGLA ILNRCALVAA IVVLPESNLA LQEQVERDAL THISLVPTQL LNLLADKQAS 240
  241 LTSIKALLLG GGAVSIDLLK QLEQRHIASF TSYGMTEMGS QITTGPALSD GTSGKLLPRR 300
  301 ELKIVDDVIW VRGECLFMGY LTENGIEKPL DADSWFYTKD KGEWDANGNL KILGRVDNMF 360
  361 ICGGENIQPE EIEAALKLHP LIDEAIVFPQ PDITYGQLPA AIIRGNIIRG NTSQDMSTIE 420
  421 KQLEQFLADK IARFKRPRRY YPWPENAEQI GLKVNRQLII KLAI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..464] PSI-BLAST 102.0 Phenylalanine activating domain of gramicidin synthetase 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • fatty acid ligase activity
    		•  4.83067429373059 bayes_pls_golite062009
  • long-chain fatty acid-CoA ligase activity
    		•  4.72692389032116 bayes_pls_golite062009
  • ligase activity, forming carbon-sulfur bonds
    		•  4.4819902512335 bayes_pls_golite062009
  • acetate-CoA ligase activity
    		•  4.48129067128523 bayes_pls_golite062009
  • acid-thiol ligase activity
    		•  2.89129353633634 bayes_pls_golite062009
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)
    		•  2.74744781333102 bayes_pls_golite062009
  • Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing) activity
    		•  2.74744781333102 bayes_pls_golite062009
  • luciferin monooxygenase activity
    		•  2.67396462766343 bayes_pls_golite062009
  • CoA-ligase activity
    		•  2.5960476232329 bayes_pls_golite062009
  • ligase activity
    		•  2.49556073715112 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.31193176808353 bayes_pls_golite062009
  • catalytic activity
    		•  1.83545185797733 bayes_pls_golite062009
  • binding
    		•  1.5312519256537 bayes_pls_golite062009
  • transcription repressor activity
    		•  1.2638869228049 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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