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Protein Overview: gi|24374817, gi|...

General Information:
Name(s) found: gi|24374817 [NCBI NR]
gi|24349501 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24374817|ref|NP_718860.1| sensor histidine kinase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349501|gb|AAN56304.1|AE015768_5 sensor histidine kinase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 1171 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: two-component signal transduction system (phosphorelay) [ISSLink to PubMed article]
    Molecular Function: two-component sensor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRSNVGSQC YQKRLTLMSR CYYLSIFLVF WSFIVSAQAK AAYYPLAQQI SSENGLSQNV  60
   61 VLALEEDNYG RIWVGTQDGL NLINNNELLV FRRDQAEHRL SGTVITDLTL DQQGRLWVAS 120
  121 DVGLDYIDTT TLESHVITLN QSISHMLLHT EQTIFYLSSQ KLYQFQINTG QVQEVKLPEL 180
  181 FQIINTLGSY DEQHLLLIGP NGFGVLNLST GDVTPLQPDI PAGTYKASTI SAERIWISQM 240
  241 EQGLYSCNLQ GLDCRTYSKA NQKLPTNNIA QIYQQDTALF LATDKGIGRL DLITDKLEWI 300
  301 YPHSQNNAYQ ASRIARNLIP AKSGDIFVGT FNGLYRIPNT YKEVQAFNTG IGGYPSNQLA 360
  361 VNKVMLNGQE RLVIAQPDKL TLWTLDASIL RLYREYDYPQ GFVPTNLFVD GGDIYLSSLT 420
  421 NNNLILTPHN GAFTSLEERF AQLGNVQLFN MNQPQEDIRV FHLLTSMKVY QQRQNKWQLL 480
  481 WEKPFLTGSA TAEYWQGRLY VASYQNGLMS ASMDNDWQKP QQWQQHHGLG IAINLFAQKD 540
  541 KLYVLTANLG LFQVDSSSPI SITQVSSRDK LASQTLVCAI RDHNGQLILS SHKGLVIFDS 600
  601 QQESLIYLSS LQGTHEQEFS QFSCGTLNNV PYFAGERGLT LVFDSQAIKS PAPQITWTHL 660
  661 DVDGLTYRLG SSGTGKLTAP EFIRLHFVAT PSDLPKQASY RYRIKSLSDE WVELKSSFIP 720
  721 MINLRPGSYQ VELESRDFSG RSSPIALATL EIAPGFWESS LAISLYIFIG LVVIALLVSH 780
  781 RIKADRSLLA LEVEKNRHQQ DYSRKLEHEV QIRTNELAQK KEEAEEANTA KTRFIAAASH 840
  841 DLKHPIGLIR LQLEQIEDNK LSYKINTSLS FLEQLVSSIV ELSRLDARVL VPQISSFDLG 900
  901 IFIAKVAEEH LTLAQSFRLN LMTDIKSDVW VASDSLLLRR VIDNILSNAI KISDPDTSVS 960
  961 LSVCQERQHA VIEVIDQGPG MTQQMQAELF TPFKRWTSRY QGSGLGLSVV KGIADLLGIS1020
 1021 LSIRSTLGEG TQFTLKLPLI DKPTFSHIED EAAIFHLGIV EDDYEQLNHL CSSLMVRGIK1080
 1081 VSGYRHAISL LQDKTAIFDA ILSDIDIGTE QDGLAYLVEY RQRLTDAKPL IYMSGNPEAG1140
 1141 LRIPSQTDLF FFSKPLKLGK LMWLLNQSKR K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..610] PSI-BLAST 7.221849 No description for 2cn3A was found.
    2 View Details [611..805] FFAS03 2.11 The eighth FN3 domain of human sidekick-2
    3 View Details [806..1044] PSI-BLAST 42.0 Structure of the entire cytoplasmic portion of a sensor histidine kinase protein
    4 View Details [1045..1171] PSI-BLAST 25.221849 PhoP receiver domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.67334813055186 bayes_pls_golite062009
  • protein binding
    		•  1.30493021305349 bayes_pls_golite062009
  • signal transducer activity
    		•  1.27638082879581 bayes_pls_golite062009
  • molecular transducer activity
    		•  1.27638082879581 bayes_pls_golite062009
  • receptor activity
    		•  0.578624943275614 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.509477493931933 bayes_pls_golite062009
  • catalytic activity
    		•  0.306113740875124 bayes_pls_golite062009
  • cytokine binding
    		•  0.0798365598476543 bayes_pls_golite062009
    3 No functions predicted.
    4
    Term Confidence Notes
  • two-component response regulator activity
    		•  7.02872640261738 bayes_pls_golite062009
  • signal transducer activity
    		•  4.51666042720644 bayes_pls_golite062009
  • molecular transducer activity
    		•  4.51666042720644 bayes_pls_golite062009
  • transcription regulator activity
    		•  3.44888100104099 bayes_pls_golite062009
  • protein histidine kinase activity
    		•  2.35011582062573 bayes_pls_golite062009
  • two-component sensor activity
    		•  2.32303301074957 bayes_pls_golite062009
  • phosphotransferase activity, nitrogenous group as acceptor
    		•  2.28838869071567 bayes_pls_golite062009
  • binding
    		•  1.22427537074115 bayes_pls_golite062009
  • DNA binding
    		•  1.11037597107903 bayes_pls_golite062009
  • protein kinase activity
    		•  1.00737355751913 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.93151849951839 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.811771244977462 bayes_pls_golite062009
  • kinase activity
    		•  0.725824770559857 bayes_pls_golite062009
  • transcription factor activity
    		•  0.62886970109503 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.476057209677045 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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