Protein Overview: gi|24348376, gi|...

General Information:
Name(s) found:	gi\|24373941 [NCBI NR] gi\|24348376 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|24373941\|ref\|NP_717984.1\| penicillin-binding protein 4 [Shewanella oneidensis MR-1] [NCBI NR] gi\|24348376\|gb\|AAN55428.1\|AE015680_3 penicillin-binding protein 4 [Shewanella oneidensis MR-1] [NCBI NR] penicillin-binding protein 4 [Shewanella oneidensis MR-1]gi\|24348376\|gb\|AAN55428.1\| penicillin-binding protein 4 [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas] penicillin-binding protein 4 [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
Organism:	Shewanella oneidensis MR-1
Length:	507 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	peptidoglycan biosynthetic process [ISS]
Molecular Function:	serine-type D-Ala-D-Ala carboxypeptidase activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METFSRLFTL PRSTGLLLTV VATALFPSNV WAAAADIKHT TLDQQMSDIA PSHSQIALLA  60
   61 HDMSNDKQLY SQQADTLFIP ASTQKVLTAV TALAALGPEF SYVTDLWSDA PIRQGHVEGS 120
  121 VYLRFSGDPT LTHEDLKALF AQLQKLGIKR IEGHLYLVGD KQEQLQAPGW VWDDLGICFA 180
  181 APVSSYIINQ NCVYGQFVPS SAKQTSRVTL SANSYGVNVS SDAIFSPQAN HDFCQLDLVR 240
  241 LSQNQYHLRG CYPGSEAIPL AIAISDPQKF AIDTLTATLK GKISLSGKVK IGHDIPDKAK 300
  301 LIASHRSAPL PELLKTMLLK SDNLIADSLF KRVGQDYYKT QGSFTYGAAA MRHILTELGI 360
  361 DLTNANIVDG SGLSRYNLLS AKQLADVLTL MYQDARFHSL IDSLPEAGVS GTLKYRQGYT 420
  421 QPPLKNRVFA KTGSMQGVAN LAGFIRIPQQ RDILFVVLEN GISPETKKQR KPAFSADFLT 480
  481 RLMATVEQQA HTSQTSVKEL NTVKKIN

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
hydrolase activity	3.49880252911035	bayes_pls_golite062009
serine-type D-Ala-D-Ala carboxypeptidase activity	3.12650314537616	bayes_pls_golite062009
penicillin binding	2.89507018520983	bayes_pls_golite062009
serine-type carboxypeptidase activity	2.70174066798582	bayes_pls_golite062009
serine-type exopeptidase activity	2.69091897402517	bayes_pls_golite062009
drug binding	2.27792716125407	bayes_pls_golite062009
peptidase activity	2.02492099567377	bayes_pls_golite062009
carboxypeptidase activity	1.96547160092829	bayes_pls_golite062009
catalytic activity	1.85492008367309	bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides	1.82206884632324	bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.13698125224034	bayes_pls_golite062009
binding	1.11566650386305	bayes_pls_golite062009
serine hydrolase activity	0.402878339821269	bayes_pls_golite062009
serine-type peptidase activity	0.392678049813626	bayes_pls_golite062009
exopeptidase activity	0.150639262435765	bayes_pls_golite062009
protein binding	0.0666688846338231	bayes_pls_golite062009

Source: Reynolds et al. 2008. Manuscript submitted

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..507]	PSI-BLAST	104.0	No description for 2ex2A was found.

Protein Overview: gi|24348376, gi|...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: