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Protein Overview: gi|24373350, gi|...

General Information:
Name(s) found: gi|24373350 [NCBI NR]
gi|24347607 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24373350|ref|NP_717393.1| ferrous iron transport protein B [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347607|gb|AAN54837.1|AE015622_6 ferrous iron transport protein B [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 764 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: ferrous iron transport [ISSLink to PubMed article]
    Molecular Function: ferrous iron uptake transmembrane transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKQFHCVTV GNPNAGKSTL FNALTGANQQ VGNWSGVTVE KKTGHFTLNG ADVYLTDLPG  60
   61 IYDLLPAGNS CDCSLDEQIA QQYLAEQRVD GIINLVDATN IERHLYLTAQ LRELSIPMVV 120
  121 VLNKIDAAIK RGICVDLTKM SQELGCPVIG VCSRDPADVA KVQAQVLDLL QGRVSEAPLL 180
  181 LDYDKQIEAG VQLLCRKDPN LSRGRALAML GNGSGCGSCK NAQLQDEVNT CTQQIAQQGH 240
  241 DIEVMVATTR FNFVERVFQS SVKADGFLTL SDKLDKLVLH PVLGIPVFLF VMYLMFMFSI 300
  301 NIGSAFIDFF DVFAGALLVD HFGALLTNIG APAWVVTILA GGVGQGIQTV STFIPVIAAL 360
  361 FLGLSILESS GYMARAAFVV DGLMRRIGLP GKAFVPMIVG FGCSVPAIMA TRTLGSERER 420
  421 IVTGMMAPFM SCGARLPVYA LFAAAFFPDS GQNLVFLLYV IGIFAAIGTG LLLRSTLLPG 480
  481 TSSAVVMELP SYELPKFKAV MVRTGKRTKS FILGAGKTIV LVVTLLNFIN AIGVDGSFGH 540
  541 EDSQASLLSV ASQKVTPIFA PMGIEQDNWP ATVGIITGIF AKEAVVGTLN SLYTNATPEG 600
  601 SELTPLADSF NEALATIPAN LFGLDLEDPL KLSVGDVSNT EVAAETQGVA TSTFSALQSG 660
  661 FTTKVAAFSY LLFILLYTPC VAAMGALVNE FGTRWATFAA TWTFALAYGS ATVVYQAATF 720
  721 AAHPLQSSLW IGFFLVALVM FYLWLKRKGR RTQQIIPGVR IITE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..342] PSI-BLAST 46.221849 Elongation factor Tu (EF-Tu), domain 2; Elongation factor Tu (EF-Tu); Elongation factor Tu (EF-Tu), N-terminal (G) domain
    2 View Details [343..447] Pfam 12.60206 No description for PF07670.5 was found. No confident structure predictions are available.
    3 View Details [448..495] Pfam 19.173925 No description for PF07664.3 was found. No confident structure predictions are available.
    4 View Details [496..764] Pfam 13.568636 No description for PF07670.5 was found. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nucleoside-triphosphatase activity
    		•  1.95073642969863 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  1.91141407779641 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  1.9017593265179 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  1.90014393273511 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.608578860823 bayes_pls_golite062009
  • transporter activity
    		•  1.55572428045529 bayes_pls_golite062009
  • ATPase activity
    		•  1.48474288797022 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.38483976298883 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  1.37457738689583 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  1.32358677895008 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.24278046928678 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  1.2014318795788 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  1.19670408144267 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  1.17063957238561 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  1.16918853509059 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  1.16885789920943 bayes_pls_golite062009
  • hydrolase activity
    		•  1.09839981963412 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  1.05321289029555 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.01376912193868 bayes_pls_golite062009
  • binding
    		•  0.855534295206446 bayes_pls_golite062009
  • catalytic activity
    		•  0.605053499033488 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.5127850474754 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.51230334374838 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.50688037036449 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  0.499229734997878 bayes_pls_golite062009
  • nucleotide binding
    		•  0.49473184426584 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  0.462652239329679 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  0.338494663195175 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.0838665746103899 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle