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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24373350, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKQFHCVTV GNPNAGKSTL FNALTGANQQ VGNWSGVTVE KKTGHFTLNG ADVYLTDLPG  60
   61 IYDLLPAGNS CDCSLDEQIA QQYLAEQRVD GIINLVDATN IERHLYLTAQ LRELSIPMVV 120
  121 VLNKIDAAIK RGICVDLTKM SQELGCPVIG VCSRDPADVA KVQAQVLDLL QGRVSEAPLL 180
  181 LDYDKQIEAG VQLLCRKDPN LSRGRALAML GNGSGCGSCK NAQLQDEVNT CTQQIAQQGH 240
  241 DIEVMVATTR FNFVERVFQS SVKADGFLTL SDKLDKLVLH PVLGIPVFLF VMYLMFMFSI 300
  301 NIGSAFIDFF DVFAGALLVD HFGALLTNIG APAWVVTILA GGVGQGIQTV STFIPVIAAL 360
  361 FLGLSILESS GYMARAAFVV DGLMRRIGLP GKAFVPMIVG FGCSVPAIMA TRTLGSERER 420
  421 IVTGMMAPFM SCGARLPVYA LFAAAFFPDS GQNLVFLLYV IGIFAAIGTG LLLRSTLLPG 480
  481 TSSAVVMELP SYELPKFKAV MVRTGKRTKS FILGAGKTIV LVVTLLNFIN AIGVDGSFGH 540
  541 EDSQASLLSV ASQKVTPIFA PMGIEQDNWP ATVGIITGIF AKEAVVGTLN SLYTNATPEG 600
  601 SELTPLADSF NEALATIPAN LFGLDLEDPL KLSVGDVSNT EVAAETQGVA TSTFSALQSG 660
  661 FTTKVAAFSY LLFILLYTPC VAAMGALVNE FGTRWATFAA TWTFALAYGS ATVVYQAATF 720
  721 AAHPLQSSLW IGFFLVALVM FYLWLKRKGR RTQQIIPGVR IITE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle