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Protein Overview: gi|24346396, gi|...

General Information:
Name(s) found: gi|24372422 [NCBI NR]
gi|24346396 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24372422|ref|NP_716464.1| endonuclease I [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24346396|gb|AAN53909.1|AE015528_2 endonuclease I [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 258 amino acids

    Gene Ontology:
    Cellular Component: outer membrane-bounded periplasmic space [ISSLink to PubMed article]
    Biological Process: DNA catabolic process [ISSLink to PubMed article]
    Molecular Function: deoxyribonuclease I activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNNTSIALR SRQVLLCLFS WLAVSASANA SPSHPSSFSQ AKVLSQSLYQ GTRQGTLPAV  60
   61 SFYCGCNIEI KGKSWKPDLT SCGYQVRKQE TRANRIEWEH IVPAWEFGHQ LQCWQQGGRK 120
  121 NCADSSKEFN KMEADMHNLV PAIGEVNGDR SNFRFSQWNG KTGQYGQCEM VIDFKNRQAQ 180
  181 PPANARGKIA RTYLYMQQTY GLKIASSQLK LFKAWDKSYP VDTIECKRDN AIAQIQGNHN 240
  241 PFVQHACNAP PLRQQLAE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..258] PSI-BLAST 106.0 Crystal structure of the periplasmic endonuclease Vvn

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • deoxyribonuclease I activity
    		•  6.32878221233886 bayes_pls_golite062009
  • hydrolase activity
    		•  3.83116222475834 bayes_pls_golite062009
  • endodeoxyribonuclease activity, producing 5'-phosphomonoesters
    		•  3.37342567983553 bayes_pls_golite062009
  • deoxyribonuclease activity
    		•  2.76079360787098 bayes_pls_golite062009
  • endonuclease activity
    		•  2.16521397757363 bayes_pls_golite062009
  • endodeoxyribonuclease activity
    		•  1.9890436405178 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.81997094124327 bayes_pls_golite062009
  • nuclease activity
    		•  1.41172530475566 bayes_pls_golite062009
  • catalytic activity
    		•  1.0342182748198 bayes_pls_golite062009
  • binding
    		•  0.663236820712292 bayes_pls_golite062009
  • caspase-activated deoxyribonuclease activity
    		•  0.571337616862676 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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