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Protein Overview: gi|24346277, gi|...

General Information:
Name(s) found: gi|24372332 [NCBI NR]
gi|24346277 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24372332|ref|NP_716374.1| iron(III) ABC transporter, permease protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24346277|gb|AAN53819.1|AE015519_5 iron(III) ABC transporter, permease protein [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 544 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: iron ion transport [ISSLink to PubMed article]
    Molecular Function: ATPase activity, coupled to transmembrane movement of substances [ISSLink to PubMed article]
    iron ion transmembrane transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILGLARSWS LTGYAIAVLL VLPLLALLLQ AAQPDEAVFG HLLSTVLPTY IANSLWLILW  60
   61 VSIGSLLLAL PCAWLMARCE FVGRRYLQWA LLLPLAMPAY IVAYVYTDLL DYAGPVQRSL 120
  121 RALFGWSSPQ DYFFPDIRTL GGAACVLSLV LFPYIYLLAR TAFMEQSLNL AHASRIMGCS 180
  181 PWQSFWRLSL PMARPALAVG VALVAMETAA DFATVNYFAV PTLTTAVYDT WLGYGNLTAA 240
  241 AKLSAIILLV VFSLIGVERF ARRKQQLFQK QSRIQAIDLY RLSPMQTLLG LGYCGMLLLL 300
  301 AFVLPSGILL SYAINYFEQS WDPLFWQLSV NSLTLALITS LVCCVIALVL MFIRRVSPRS 360
  361 SDALPSRLAS TGYALPGTVL AIGVLVPLTL LDFAINDIAD WLGMAGPGLL LTGSTVALVF 420
  421 AFCVRFVAIA IGSVESSYKR ISPSLDMVSL TLGQSPRRLL QRVHLPLLTK GLFAGALLVF 480
  481 IESMKELPAA LLLRPIGFEN LATYVFQFVS DEKLEHGALP AIVIVLVGLV PLIYLNRSLE 540
  541 QDNR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..269] FFAS03 7.34 No description for 2onkC was found.
    2 View Details [270..544] PSI-BLAST 24.0 No description for 2onkC was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ATPase activity, coupled to transmembrane movement of substances
    		•  7.61517440483825 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  7.61475955752567 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  7.61475955752567 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  7.60261285611608 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  7.59280303111267 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  7.51217805691059 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  6.95724531600418 bayes_pls_golite062009
  • ATPase activity
    		•  6.62620720611918 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  6.31173441402571 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  6.23822548232138 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  6.21828378422716 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  6.21791205758921 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  5.46058403247103 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.84048533553771 bayes_pls_golite062009
  • hydrolase activity
    		•  4.5940497987178 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  4.17977204081224 bayes_pls_golite062009
  • transporter activity
    		•  4.16850252614298 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  4.07281957844021 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.61142533583701 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  3.37660206025104 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  2.9260252024097 bayes_pls_golite062009
  • anion transmembrane-transporting ATPase activity
    		•  2.85525880225875 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
    		•  2.19359047382598 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  2.147054904918 bayes_pls_golite062009
  • sulfate transmembrane-transporting ATPase activity
    		•  2.12981939421008 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  1.90343616526346 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  1.6718548573993 bayes_pls_golite062009
  • oligosaccharide-transporting ATPase activity
    		•  1.62768691451517 bayes_pls_golite062009
  • oligosaccharide transmembrane transporter activity
    		•  1.62768691451517 bayes_pls_golite062009
  • maltose-transporting ATPase activity
    		•  1.62768691451517 bayes_pls_golite062009
  • alpha-glucoside transmembrane transporter activity
    		•  1.5877861023737 bayes_pls_golite062009
  • maltose transmembrane transporter activity
    		•  1.5877861023737 bayes_pls_golite062009
  • disaccharide transmembrane transporter activity
    		•  1.5877861023737 bayes_pls_golite062009
  • glucoside transmembrane transporter activity
    		•  1.54998466398412 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  1.53656434391799 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  1.4745579365074 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  0.737817335114385 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  0.634824157502542 bayes_pls_golite062009
  • catalytic activity
    		•  0.350058049038907 bayes_pls_golite062009
  • sulfate transmembrane transporter activity
    		•  0.314028059232496 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.0914244193736007 bayes_pls_golite062009
  • symporter activity
    		•  0.0914244193736007 bayes_pls_golite062009
    2
    Term Confidence Notes
  • ATPase activity, coupled to transmembrane movement of substances
    		•  7.98776119907207 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  7.98726234902655 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  7.98726234902655 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  7.97287417765536 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  7.96249144456164 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  7.8678894318504 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  7.29227234008448 bayes_pls_golite062009
  • ATPase activity
    		•  6.94069583578738 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  6.59903874016214 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  6.52169210550643 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  6.50067149801529 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  6.5003333073452 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  5.78398318541319 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  5.07829337366931 bayes_pls_golite062009
  • hydrolase activity
    		•  4.78607811092587 bayes_pls_golite062009
  • transporter activity
    		•  4.47791794099048 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  4.39634414867723 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  4.35124450289762 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.91409799494188 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  3.49869491399328 bayes_pls_golite062009
  • anion transmembrane-transporting ATPase activity
    		•  3.2006428628965 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  2.95360205425391 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  2.67115360425434 bayes_pls_golite062009
  • sulfate transmembrane-transporting ATPase activity
    		•  2.56867883684303 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
    		•  2.42763030383098 bayes_pls_golite062009
  • maltose-transporting ATPase activity
    		•  2.14010989459818 bayes_pls_golite062009
  • oligosaccharide-transporting ATPase activity
    		•  2.14010989459818 bayes_pls_golite062009
  • oligosaccharide transmembrane transporter activity
    		•  2.14010989459818 bayes_pls_golite062009
  • alpha-glucoside transmembrane transporter activity
    		•  2.09224118357857 bayes_pls_golite062009
  • maltose transmembrane transporter activity
    		•  2.09224118357857 bayes_pls_golite062009
  • disaccharide transmembrane transporter activity
    		•  2.09224118357857 bayes_pls_golite062009
  • glucoside transmembrane transporter activity
    		•  2.04706530621258 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  1.92041789093512 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  1.81715503217512 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  1.79613658743425 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  1.74937989644368 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  0.96228415837358 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  0.798639167073698 bayes_pls_golite062009
  • sulfate transmembrane transporter activity
    		•  0.72950761930647 bayes_pls_golite062009
  • symporter activity
    		•  0.483541714040201 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.483541714040201 bayes_pls_golite062009
  • catalytic activity
    		•  0.427775057748038 bayes_pls_golite062009
  • maltooligosaccharide-importing ATPase activity
    		•  0.16532450344344 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  0.0202682073710961 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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