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Protein Overview: gi|7487965, gi|3...

General Information:
Name(s) found: gi|7487965 [NCBI NR]
gi|3269298 [NCBI NR]
gi|15234096 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • pir||T05761 myosin heavy chain M4I22.180 - Arabidopsis thaliana [NCBI NR]
  • gi|3269298|emb|CAA19731.1| myosin heavy chain-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15234096|ref|NP_194467.1| VIIIB (Myosin-like protein VIIB); motor [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1126 amino acids

    Gene Ontology:
    Cellular Component: myosin complex [IEA][ISS]
    chloroplast [IEA]
    Biological Process: actin filament-based movement [TAS]
    Molecular Function: motor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKSSVKEIL ESLRLLDSSE RSSSLPSPST FRAPMPLIRQ SLPAKFRNAI SLESKTIEKE  60
   61 DKDWSTEQIT QSAEKEKTGN EVVKISTAQM SRAKNSHDPE WINSAEYFVR EKLCVWCRVA 120
  121 ANGQWHLGKI HSTSSSDDVC VMLSANDDVR TMEEIFPANP EILEGVEDLT QLSYLNEPSL 180
  181 LYNLRVRYSQ DLIYSKAGPV LIAVNPFKNV QIYGEEFLSA YQKNALDAPH VYAVADAAYD 240
  241 DMMRGDGESG AGKTETAKYA MQYLEALGGG SFGVENEILK TNCILEAFGN AKTSRNDNSS 300
  301 RFGKLMEIHF SAKGKICGAK LETFSLDQSR VAQLCNGERC YHIFYQLCAG ASPILKERLK 360
  361 IKAASEYNYL NQSNCLTIDR TDDAQKFHKL MEAFNIVQIP QEYQERTFAL LAAVLWLGNV 420
  421 SFEVIDNENH VEVVADEAVT NVAMLMGCNS KKLMVVLSTC KLQAGRDCIA KRLTLRQATD 480
  481 MRDSLAKIIY ASLFNWLVEQ INISLEVGNS RTGRSISILD IYGFESFKDN SFEQFCINYA 540
  541 NERLQQHFNR HLFKLEQEEY EGDGIDWTKV EFIDNQECLN LIEKKPIGLV SLLNEESNFP 600
  601 KATDTTFANK LKQHLNANSC FKGERGRGFR IKHYAGEVLY NTNGFLEKNR DPLHVDLIQL 660
  661 LSLCKCQLLN LFSTKMHHDF LKPATFSDSM NQSVIAKFKG QLFKLMNKLE DTTPHFIRCI 720
  721 KPNSNQLPGL YEENHVLQQL RCCGVLEIVR ISRSGYPTRL THQELAVRYG CLLLDTRISQ 780
  781 DPLSTSKAIL KQCNLPPEMY QVGYTKIYLR TGVISVLEER KKYVLRGILG LQKQFRGYQT 840
  841 REYFHNMRNA AVILQSYIRG ENARRNYIVV GESAIVSTAI TKELDAAIHL QYMVRKWLAR 900
  901 KLLNSTQQKN KPRNEKKKTR RKSTKRVSED KVVFLPDVCV QPCVLADLQS RVLKVEAAIM 960
  961 QKEDENTALQ EELQRFEERW LENETRMKSM EDTWQKHMSS MQMSLAAACK VLAPDKTASH1020
 1021 GTDSEDTMSF GTPTKELKGS LSDVNNLSTE FDQRSVIIHE DPKSLVEVKS DSISNRKQHA1080
 1081 EELRRLKSRF EKWKKDYKTR LRETKARVRL NGDEGRHRNW WCKKSY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..104] FFAS03 1.04 NMR structure of the R3H domain from Poly(A)-specific Ribonuclease
    2 View Details [105..1126] PSI-BLAST 1000.0 No description for 2dfsA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.09267045092316 bayes_pls_golite062009
  • DNA binding
    		•  0.868380724431874 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.829906163034138 bayes_pls_golite062009
  • hydrolase activity
    		•  0.79878331793217 bayes_pls_golite062009
  • protein binding
    		•  0.741098311996669 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.723644432824581 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.307976975694004 bayes_pls_golite062009
  • catalytic activity
    		•  0.307971467423079 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.264996405893944 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.254517531059179 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.251958606412911 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle