| Protein: | gi|7487965, gi|3... |
| Organism: | Arabidopsis thaliana |
| Length: | 1126 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7487965, gi|3....
| Description | E-value | Query Range |
Subject Range |
|
|
855.0 | [0..42] | [1044..136] |
|
Region A: Residues: [1-104] |
1 11 21 31 41 51
| | | | | |
1 MMKSSVKEIL ESLRLLDSSE RSSSLPSPST FRAPMPLIRQ SLPAKFRNAI SLESKTIEKE 60
61 DKDWSTEQIT QSAEKEKTGN EVVKISTAQM SRAKNSHDPE WINS
|
| Detection Method: |  |
| Confidence: | 1.04 |
| Match: | 1ug8A |
| Description: | NMR structure of the R3H domain from Poly(A)-specific Ribonuclease |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.09267045092316 | bayes_pls_golite062009 |
| DNA binding | 0.868380724431874 | bayes_pls_golite062009 |
| nucleic acid binding | 0.829906163034138 | bayes_pls_golite062009 |
| hydrolase activity | 0.79878331793217 | bayes_pls_golite062009 |
| protein binding | 0.741098311996669 | bayes_pls_golite062009 |
| transcription regulator activity | 0.723644432824581 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.307976975694004 | bayes_pls_golite062009 |
| catalytic activity | 0.307971467423079 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.264996405893944 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.254517531059179 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.251958606412911 | bayes_pls_golite062009 |
|
Region A: Residues: [105-1126] |
1 11 21 31 41 51
| | | | | |
1 AEYFVREKLC VWCRVAANGQ WHLGKIHSTS SSDDVCVMLS ANDDVRTMEE IFPANPEILE 60
61 GVEDLTQLSY LNEPSLLYNL RVRYSQDLIY SKAGPVLIAV NPFKNVQIYG EEFLSAYQKN 120
121 ALDAPHVYAV ADAAYDDMMR GDGESGAGKT ETAKYAMQYL EALGGGSFGV ENEILKTNCI 180
181 LEAFGNAKTS RNDNSSRFGK LMEIHFSAKG KICGAKLETF SLDQSRVAQL CNGERCYHIF 240
241 YQLCAGASPI LKERLKIKAA SEYNYLNQSN CLTIDRTDDA QKFHKLMEAF NIVQIPQEYQ 300
301 ERTFALLAAV LWLGNVSFEV IDNENHVEVV ADEAVTNVAM LMGCNSKKLM VVLSTCKLQA 360
361 GRDCIAKRLT LRQATDMRDS LAKIIYASLF NWLVEQINIS LEVGNSRTGR SISILDIYGF 420
421 ESFKDNSFEQ FCINYANERL QQHFNRHLFK LEQEEYEGDG IDWTKVEFID NQECLNLIEK 480
481 KPIGLVSLLN EESNFPKATD TTFANKLKQH LNANSCFKGE RGRGFRIKHY AGEVLYNTNG 540
541 FLEKNRDPLH VDLIQLLSLC KCQLLNLFST KMHHDFLKPA TFSDSMNQSV IAKFKGQLFK 600
601 LMNKLEDTTP HFIRCIKPNS NQLPGLYEEN HVLQQLRCCG VLEIVRISRS GYPTRLTHQE 660
661 LAVRYGCLLL DTRISQDPLS TSKAILKQCN LPPEMYQVGY TKIYLRTGVI SVLEERKKYV 720
721 LRGILGLQKQ FRGYQTREYF HNMRNAAVIL QSYIRGENAR RNYIVVGESA IVSTAITKEL 780
781 DAAIHLQYMV RKWLARKLLN STQQKNKPRN EKKKTRRKST KRVSEDKVVF LPDVCVQPCV 840
841 LADLQSRVLK VEAAIMQKED ENTALQEELQ RFEERWLENE TRMKSMEDTW QKHMSSMQMS 900
901 LAAACKVLAP DKTASHGTDS EDTMSFGTPT KELKGSLSDV NNLSTEFDQR SVIIHEDPKS 960
961 LVEVKSDSIS NRKQHAEELR RLKSRFEKWK KDYKTRLRET KARVRLNGDE GRHRNWWCKK1020
1021 SY
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 2dfsA |
| Description: | No description for 2dfsA was found. |
