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Protein Overview: gi|190407918

General Information:
Name(s) found: gi|190407918 [NCBI NR]
Description(s) found:
  • gi|190407918|gb|EDV11183.1| ATP-dependent RNA helicase SUV3, mitochondrial precursor [Saccharomyces cerevisiae RM11-1a] [NCBI NR]
    • Organism: Saccharomyces cerevisiae RM11-1a
    Length: 737 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALVKYSTVF FPLRSLRLFV SIKKAYYHSE PHSIDLFHDK DWIVKRPKFL NLPKNEHSKL  60
   61 DIFQFNFNKS ESNNVYLQDS SFKDNLDKAM QFIYNDKLSS LDAKQVPIKN LAWLKLRDYI 120
  121 YQQLKDPKLQ AKTYVPSVSE IIHPSSPGNL ISLLINCNKI SNLVWKSVLK YSLSNNITTL 180
  181 DKFIHVLQQT FDHVYEQEIL PMMTNTDDTD GAHNVDITNP AEWFPEARKI RRHIIMHIGP 240
  241 TNSGKTYRAL QKLKSVDRGY YAGPLRLLAR EVYDRFHAEK IRCNLLTGEE VIRDLDDRGN 300
  301 SAGLTSGTVE MVPINQKFDV VVLDEIQMMS DGDRGWAWTN ALLGVVSKEV HLCGEKSVLP 360
  361 LVKSIVKMTG DKLTINEYER LGKLSVEEKP IKDGIKGLRK GDCVVAFSKK KILDLKLKIE 420
  421 KDTNLKVAVI YGSLPPETRV QQAALFNNGE YDIMVASDAI GMGLNLSIDR VVFTTNMKYN 480
  481 GEELMEMTSS QIKQIGGRAG RFKSRSASGG VPQGFITSFE SKVLKSVRKA IEAPVEYLKT 540
  541 AVTWPTDEIC AQLMTQFPPG TPTSVLLQTI SDELEKSSDN LFTLSDLKSK LKVIGLFEHM 600
  601 EDIPFFDKLK LSNAPVKDMP MVTKAFTKFC ETIAKRHTRG LLSYRLPFNL LDYNCIPNES 660
  661 YSLEVYESLY NIITLYFWLS NRYPNYFIDM ESAKDLKYFC EMIIFEKLDR LKKNPYAHKP 720
  721 FGSTRGHLSS SRRRLRT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..135] deduced N/A No confident structure predictions are available.
    2 View Details [136..542] PSI-BLAST 84.30103 Initiation factor 4a
    3 View Details [543..655] PSI-BLAST 7.0 Nucleotide excision repair enzyme UvrB
    4 View Details [656..737] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • hydrolase activity
    		•  2.18454736627863 bayes_pls_golite062009
  • binding
    		•  1.62320027057768 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.02467925786178 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • DNA binding
    		•  0.526183203901145 bayes_pls_golite062009
  • ribonuclease activity
    		•  0.436561333238012 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.390949264169589 bayes_pls_golite062009
  • helicase activity
    		•  0.32448546535964 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.22341412535263 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.222180491809685 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.219296317139543 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.194147556947887 bayes_pls_golite062009
  • nucleotide binding
    		•  0.114848452385726 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.10713474095071 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.0916519414118148 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.0915913646217636 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle