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Protein Overview: gi|208966756

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..81] PSI-BLAST 8.0 TFIIH Mat1 subunit
2 View Details [82..309] PSI-BLAST 5.39794 No description for 2i1jA was found.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • general RNA polymerase II transcription factor activity
  • 6.51043144330453 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 3.14238164427954 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
  • 3.12673603940339 bayes_pls_golite062009
  • binding
  • 2.78710909602478 bayes_pls_golite062009
  • transcription regulator activity
  • 2.72498741013971 bayes_pls_golite062009
  • protein binding
  • 2.64803540957326 bayes_pls_golite062009
  • nucleic acid binding
  • 2.32387297115017 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 2.10988747259202 bayes_pls_golite062009
  • DNA binding
  • 2.00904221080834 bayes_pls_golite062009
  • transcription repressor activity
  • 1.98209395225978 bayes_pls_golite062009
  • transcription activator activity
  • 1.45530270292081 bayes_pls_golite062009
  • transcription factor activity
  • 1.22579085356684 bayes_pls_golite062009
  • transcription factor binding
  • 1.11842175076436 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.926364718530146 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.90321253993065 bayes_pls_golite062009
  • hydrolase activity
  • 0.52386813728704 bayes_pls_golite062009
  • transcription corepressor activity
  • 0.384990496120483 bayes_pls_golite062009
  • ligase activity
  • 0.34187399168736 bayes_pls_golite062009
  • transcription coactivator activity
  • 0.255669498391574 bayes_pls_golite062009
  • transcription cofactor activity
  • 0.233838999434784 bayes_pls_golite062009
  • catalytic activity
  • 0.14112008370434 bayes_pls_golite062009
  • enzyme binding
  • 0.104373352314595 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 0.024993043379745 bayes_pls_golite062009
    2 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle