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Protein Overview: gi|221320949

General Information:
Name(s) found: gi|221320949 [NCBI NR]
Description(s) found:
  • gi|221320949|ref|ZP_03602243.1| agmatinase [Bacillus subtilis subsp. subtilis str. JH642] [NCBI NR]
    • Organism: Bacillus subtilis subsp. subtilis str. JH642
    Length: 290 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFDEAYSGK VFIASRPEWE EADAILYGMP MDWTVSYRPG SRFGPSRIRE VSIGLEEYSP  60
   61 YLDRDLADLN FFDAGDIPLP FGNPQRSLDM IEEYVDSILE KGKFPMGMGG EHLVSWPVIK 120
  121 AMYKKYPDLA IIHFDAHTDL RVDYEGEPLS HSTPIRKAAE LIGPHNVYSF GIRSGMKEEF 180
  181 EWAKENGMHI SKFEVLEPLK EVLPKLAGRP VYVTIDIDVL DPAHAPGTGT VDAGGITSKE 240
  241 LLASVHEIAR SEVNVKGADL VEVAPVYDHS EQTANTASKI IREMLLGFVK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..290] PSI-BLAST 70.69897 Proclavaminate amidino hydrolase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • arginase activity
    		•  6.00681443593951 bayes_pls_golite062009
  • agmatinase activity
    		•  3.73238467801147 bayes_pls_golite062009
  • hydrolase activity
    		•  2.11707868768295 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  1.72243397396987 bayes_pls_golite062009
  • catalytic activity
    		•  1.68836803454021 bayes_pls_golite062009
  • protein deacetylase activity
    		•  1.29904902150637 bayes_pls_golite062009
  • histone deacetylase activity
    		•  1.25334418126662 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
    		•  1.01223037319069 bayes_pls_golite062009
  • binding
    		•  0.965508804884565 bayes_pls_golite062009
  • deacetylase activity
    		•  0.616633535035513 bayes_pls_golite062009
  • transcription factor binding
    		•  0.48632720319646 bayes_pls_golite062009
  • protein binding
    		•  0.473174527981622 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.359136428158927 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.13614857264874 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
    		•  0.0917282383800223 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle