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Protein Overview: AB2D_ARATH

General Information:
Name(s) found: AB2D_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75324320|sp|Q6NLC1.1|AB2D_ARATH RecName: Full=ABC transporter D family member 2, chloroplastic; Short=ABC transporter ABCD.2; Short=AtABCD2; Flags: Precursor [NCBI NR]
  • gi|46402454|gb|AAS92329.1| At1g54350 [Arabidopsis thaliana] [NCBI NR]
  • gi|45773818|gb|AAS76713.1| At1g54350 [Arabidopsis thaliana] [NCBI NR]
  • gi|22330243|ref|NP_175837.2| ABC transporter family protein [Arabidopsis thaliana] [NCBI NR]
  • ABC transporter D family member 2, chloroplastic OS=Arabidopsis thaliana GN=ABCC2 PE=1 SV=1 [Swiss-Prot]
  • At1g54350 [Arabidopsis thaliana]gi|45773818|gb|AAS76713.1| At1g54350 [Arabidopsis thaliana]gi|22330243|ref|NP_175837.2| ABC transporter family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 ABC transporter family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | ABC transporter family protein | chr1:20290584-20293912 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g54350 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | ABC transporter family protein | chr1:20286917-20290245 FORWARD LENGTH=706 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 706 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: transport [IEA]
    Molecular Function: ATPase activity, coupled to transmembrane movement of substances [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILMITAPVC PPHLLLRHSS LLRHESSIGN FHRKKNPRFR TVSCSSLLPQ PSVRPDKASE  60
   61 LKTLWKKFYK VASPYWFSED KDQARLRLAA VFALTLATTG ISVGFNFLGR DFYNSLANKD 120
  121 QEQFTKQLFY YLCAFAGGIP FFVLRDYTKE TLSLRWRSWM TKYYLQRYLK DQTFYKIQSQ 180
  181 SIIDNPDQRL VDDLSSFTGT ALSFSLTLVN ATIDLISFSN ILFTIYPPLF LVLLLYSFGG 240
  241 TAISVFLGKG LVNLNFLQEK KEADFRYSLV RVRENAESIA FYGGEQNEMQ LLLQRFRSAF 300
  301 DNLTELLIAS RNLEFFTDGY RYLIQILPVA VVAPMYFSGK IEFGVINQSV SAFNHILGDF 360
  361 SLVVYQFQAI SSFSAVIDRL GEFDDLLDNN IFRDPSDTVD EIELTYQSEM NSSLLDTNGS 420
  421 IKSQPNQKRL EIEELTLQTP TNGTTLVHNL SADVYDKDHL LIMGPSGSGK TSLLRAMAGL 480
  481 WRSGKGKITF YLDPEVDFTQ EKSDTQENSG KRGDVLFLPQ RPYMVLGSLR QQLLYPTWSA 540
  541 TVEETTPGGS NIDGSPPLLI REDGNEKPTT DDLMRTLEKV CLGHIADRFG GLDSIHEWSS 600
  601 VLSLGEQQRL AFARLLLSQP KLALLDESTS ALDEANEAFL YQQIQSAGIT YISIGHRRTL 660
  661 TKFHNKILQI STADPKSNER NWRIEDVDAQ DSLYGRLNQK EVPSES

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..706] PSI-BLAST 133.0 No description for 2hydA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ATPase activity, coupled to transmembrane movement of substances
    		•  5.57844095962502 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  5.57813579764186 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  5.57813579764186 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  5.5689620139321 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  5.55992639965745 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  5.50005167063544 bayes_pls_golite062009
  • lipid transporter activity
    		•  5.43964691043504 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  4.98276715440477 bayes_pls_golite062009
  • ATPase activity
    		•  4.69795387297193 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  4.45923622153365 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  4.39781350157199 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  4.38133275795019 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  4.38085303582726 bayes_pls_golite062009
  • transporter activity
    		•  3.71239480053329 bayes_pls_golite062009
  • hydrolase activity
    		•  3.14498892233323 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.13960906549884 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.1318898376276 bayes_pls_golite062009
  • ATP binding
    		•  3.01346604299372 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  2.96271391116269 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  2.91131545957759 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  2.70262534541085 bayes_pls_golite062009
  • ribonucleotide binding
    		•  2.70178191749524 bayes_pls_golite062009
  • purine nucleotide binding
    		•  2.6583477492092 bayes_pls_golite062009
  • nucleotide binding
    		•  2.62374702628143 bayes_pls_golite062009
  • binding
    		•  1.69327117652379 bayes_pls_golite062009
  • peptide-transporting ATPase activity
    		•  1.37783759788533 bayes_pls_golite062009
  • peptide transporter activity
    		•  1.19353064661766 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.08692822631118 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.977237423302079 bayes_pls_golite062009
  • motor activity
    		•  0.87979065815418 bayes_pls_golite062009
  • GTPase activity
    		•  0.83849854735032 bayes_pls_golite062009
  • tapasin binding
    		•  0.658285861919359 bayes_pls_golite062009
  • cholesterol transporter activity
    		•  0.644421039250979 bayes_pls_golite062009
  • guanyl nucleotide binding
    		•  0.640772201693186 bayes_pls_golite062009
  • guanyl ribonucleotide binding
    		•  0.63468044350616 bayes_pls_golite062009
  • GTP binding
    		•  0.621689261700018 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.557919489256916 bayes_pls_golite062009
  • sterol transporter activity
    		•  0.51525091036229 bayes_pls_golite062009
  • protein transporter activity
    		•  0.498432226280822 bayes_pls_golite062009
  • protein transmembrane transporter activity
    		•  0.46552249844591 bayes_pls_golite062009
  • drug transmembrane transporter activity
    		•  0.38711726712063 bayes_pls_golite062009
  • protein binding
    		•  0.378225828131122 bayes_pls_golite062009
  • fatty acid transporter activity
    		•  0.278494397068437 bayes_pls_golite062009
  • hydrogen ion transporting ATP synthase activity, rotational mechanism
    		•  0.213018989352421 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  0.123304946374679 bayes_pls_golite062009
  • microtubule motor activity
    		•  0.11674780318211 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  0.0775601177068852 bayes_pls_golite062009
  • macromolecule transmembrane transporter activity
    		•  0.00571427458217011 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven protein transmembrane transporter activity
    		•  0.00571427458217011 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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