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Protein Overview: gi|29726249, gi|...

General Information:
Name(s) found: gi|37928247 [NCBI NR]
gi|37926395 [NCBI NR]
gi|29726249 [NCBI NR]
gi|29726248 [NCBI NR]
Description(s) found:
Found 7 descriptions.
SHOW ALL
  • gi|37928247|pdb|1UOT|P Chain P, Human Cd55 Domains 3 & 4 [NCBI NR]
  • gi|37926395|pdb|1H2Q|P Chain P, Human Cd55 Domains 3 & 4 [NCBI NR]
  • gi|29726249|pdb|1H03|Q Chain Q, Human Cd55 Domains 3 & 4 [NCBI NR]
  • gi|29726248|pdb|1H03|P Chain P, Human Cd55 Domains 3 & 4 [NCBI NR]
    • Organism: Homo sapiens
    Length: 125 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSCPNPGEIR NGQIDVPGGI LFGATISFSC NTGYKLFGST SSFCLISGSS VQWSDPLPEC  60
   61 REIYCPAPPQ IDNGIIQGER DHYGYRQSVT YACNKGFTMI GEHSIYCTVN NDEGEWSGPP 120
  121 PECRG

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|219109210, gi... gi|29726249, gi|...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..125] PSI-BLAST 38.154902 Complex Of Echovirus Type 12 With Domains 1, 2, 3 and 4 Of Its Receptor Decay Accelerating Factor (Cd55) By Cryo Electron Microscopy At 16 A

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cell surface binding
    		•  4.33652203109712 bayes_pls_golite062009
  • complement binding
    		•  4.20610055582645 bayes_pls_golite062009
  • complement component C3b binding
    		•  4.08083046146348 bayes_pls_golite062009
  • eukaryotic cell surface binding
    		•  3.91640742116244 bayes_pls_golite062009
  • lipoprotein lipase activator activity
    		•  2.95441743480602 bayes_pls_golite062009
  • peptide antigen binding
    		•  2.75484182262813 bayes_pls_golite062009
  • interleukin-2 binding
    		•  2.71513067590075 bayes_pls_golite062009
  • antigen binding
    		•  2.37908978478817 bayes_pls_golite062009
  • binding
    		•  2.33940742543305 bayes_pls_golite062009
  • receptor activity
    		•  2.2622963118587 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  2.20043691095891 bayes_pls_golite062009
  • interleukin-2 receptor activity
    		•  2.06172922937272 bayes_pls_golite062009
  • protein binding
    		•  1.97546801934296 bayes_pls_golite062009
  • signal transducer activity
    		•  1.96461646672141 bayes_pls_golite062009
  • molecular transducer activity
    		•  1.96461646672141 bayes_pls_golite062009
  • olfactory receptor activity
    		•  1.74347166869471 bayes_pls_golite062009
  • GABA receptor activity
    		•  1.69182753457619 bayes_pls_golite062009
  • glycoprotein binding
    		•  1.32101118463761 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  1.23968073093287 bayes_pls_golite062009
  • polysaccharide binding
    		•  1.17886521711108 bayes_pls_golite062009
  • growth factor binding
    		•  1.16513710870336 bayes_pls_golite062009
  • cytokine binding
    		•  1.15155354706712 bayes_pls_golite062009
  • pattern binding
    		•  1.12569810277318 bayes_pls_golite062009
  • opsonin binding
    		•  1.0527649340829 bayes_pls_golite062009
  • heparin binding
    		•  1.0223898285825 bayes_pls_golite062009
  • cytokine receptor activity
    		•  0.90184673014638 bayes_pls_golite062009
  • peptidase activity
    		•  0.594940121983039 bayes_pls_golite062009
  • hydrolase activity
    		•  0.540407885244421 bayes_pls_golite062009
  • lipase activator activity
    		•  0.35955770537116 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.308419080170741 bayes_pls_golite062009
  • GABA-B receptor activity
    		•  0.292458239230879 bayes_pls_golite062009
  • catalytic activity
    		•  0.252597265474331 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.15682585610523 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.72

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle