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Protein Overview: gi|30696077, gi|...

General Information:
Name(s) found: gi|30696077 [NCBI NR]
gi|110737797 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|30696077|ref|NP_851172.1| disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] [NCBI NR]
  • gi|110737797|dbj|BAF00837.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1229 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    apoptosis [IEA]
    defense response [ISS]
    Molecular Function: nucleotide binding [IEA]
    ATP binding [IEA]
    protein binding [IEA]
    transmembrane receptor activity [IEA]
    nucleoside-triphosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSSRSWT YDVFPSFSGE DVRKSFLSHL LKKLHRKSIN TFIDNNIERS HAIAPDLLSA  60
   61 INNSMISIVV FSKKYASSTW CLNELVEIHK CYKELTQIVI PIFYEVDPSD VRKQTREFGE 120
  121 FFKVTCVGKT EDVKQQWIEA LEEVASIAGH DSKNWPNEAN MIEHIAKDVL NKLIATSSSN 180
  181 CFGDLVGIEA HLKAVKSILC LESEEARMVG ILGPSGIGKT TIARILYSKL SSQFDYHVFG 240
  241 SFKRTNQDNY GMKLSWEEQF LSEILDQKDL KISQLGVVKQ RLKHKKVLIV LDDVDNLELL 300
  301 KTLVGQTGWF GPGSRIIVTT QDRILLKSHK IDHIYEVGYP SRKLALRILC RSAFDRNSPP 360
  361 DGFMQLANEV TELVGNLPLA LNIMGSSLKG RDKEEWIEMM PSLRNSLVDG EILKTLRVSY 420
  421 DRLHGNYQEI FLYIACLLNC CGVEYIISML GDNAIIGLKI LAEKSLIHIS PLDKTVEMHS 480
  481 LLQKLGRKIV RDESFGNPGK RRFLLDAEDI CDVFTDNTGT ETVLGISLNT LEINGTLSVD 540
  541 DKSFQGMHNL QFLKVFENWR RGSGEGILSL PQGLNSLPRK LRLLHWYKFP LRCMPSNFKA 600
  601 EYLVNLEMAY SQLERLWEGT QQLGSLKKMD LSKSENLKEI PDLSYAVNLE EMDLCSCKSL 660
  661 VTLPSSVRNL DKLRVLRMSS CSNVEVLPTD LNLESLDLLN LEDCSQLRSF PQISRNISIL 720
  721 NLSGTAIDEE SSLWIENMSR LTHLRWDFCP LKSLPSNFRQ EHLVSLHMTH SKLEKLWEGA 780
  781 QPFGNLVNID LSLSEKLKEF PNLSKVTNLD TLDLYGCKSL VTVPSSIQSL SKLTELNMRR 840
  841 CTGLEALPTD VNLESLHTLD LSGCSKLTTF PKISRNIERL LLDDTAIEEV PSWIDDFFEL 900
  901 TTLSMKGCKR LRNISTSICE LKCIEVANFS DCERLTEFDD ASMVRRILRT IDDLIALYEE 960
  961 ASFLHAIFVL CRKLVSICAM VFKYPQALSY FFNSPEADLI FANCSSLDRD AETLILESNH1020
 1021 GCAVLPGGKV PNCFMNQACG SSVSIPLHES YYSEEFLGFK ACIVLETPPD LNFKQSWIWV1080
 1081 RCYFRDKCVE HSVQFSWDSN KMDHLLMINF RLPTKEIIGC PSQLDTDDLM FFFYHHMYYA1140
 1141 CNSYVNPSPC SVQRIKGCGI KFWDVSPRVL SQSELDTYFS WPVKGEGEAE GESEGESEDE1200
 1201 QEEDEDEDAY LEIEDDSSLS SFVGGGEYW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..154] Pfam 54.026872 No description for PF01582.12 was found. No confident structure predictions are available.
    2 View Details [155..622] PSI-BLAST 10.221849 Structure of the apoptotic protease-activating factor 1 bound to ADP
    3 View Details [623..690] PSI-BLAST 12.0 No description for 2z63A was found.
    4 View Details [691..1229] PSI-BLAST 16.522879 No description for 3cigA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle