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Protein Overview: SCP28_ARATH

General Information:
Name(s) found: SCP28_ARATH [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
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  • Serine carboxypeptidase-like 28 OS=Arabidopsis thaliana GN=SCPL28 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 462 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: proteolysis [IEA][ISS]
    Molecular Function: serine-type carboxypeptidase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMITKKLYQC MCLLCMVIAL LDVVSSDDAK EQKMKDKIIS LPGQPPNLNF SQFSGYVTVD  60
   61 PAAGRALFYW LTEAPRPSGT KPLVLWLNGG PGCSSIAYGA SEEVGPFRVN PDGKTLRLNL 120
  121 YAWNKVANVL FLDSPAGVGF SYTNTSSDEL TVGDKRTGED AYRFLVRWLE RFPEYKERAF 180
  181 YIAGESYAGH YIPELAQLIV NRNKGAKNPT INLKGILMGN PLVDDYNDNK GMRDYWWNHG 240
  241 LISDESYNDL TKWCLNDSIL FPKLNCNAAL NQALSEFGDI DPYNINSPAC TTHASSNEWM 300
  301 QAWRYRGNDE CVVGYTRKYM NDPNVHKSFH ARLNGSTPWT PCSRVIRKNW KDSPKSMLPI 360
  361 IKNLLQAHLR IWIFSGDSDA VLPLSGTRHS INAMKLKSSK RWYPWYHSHG LVGGWSQVYE 420
  421 DGLLTYTTVR AAGHEVPLSQ PRLALFLFTH FLANHSLPSS PS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..290] PSI-BLAST 79.69897 Serine carboxypeptidase II
    2 View Details [291..462] PSI-BLAST 37.0 COMPLEX OF THE WHEAT SERINE CARBOXYPEPTIDASE, CPDW-II, WITH THE MICROBIAL PEPTIDE ALDEHYDE INHIBITOR, ANTIPAIN, AND ARGININE AT ROOM TEMPERATURE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  4.09944423676394 bayes_pls_golite062009
  • peptidase activity
    		•  2.49064988313037 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  2.11440496336538 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  2.10044305272656 bayes_pls_golite062009
  • palmitoyl-(protein) hydrolase activity
    		•  1.46950384675756 bayes_pls_golite062009
  • catalytic activity
    		•  1.39629727416851 bayes_pls_golite062009
  • binding
    		•  0.780364496307855 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.35106325845064 bayes_pls_golite062009
  • palmitoyl-CoA hydrolase activity
    		•  0.1174692258176 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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