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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP28_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMITKKLYQC MCLLCMVIAL LDVVSSDDAK EQKMKDKIIS LPGQPPNLNF SQFSGYVTVD  60
   61 PAAGRALFYW LTEAPRPSGT KPLVLWLNGG PGCSSIAYGA SEEVGPFRVN PDGKTLRLNL 120
  121 YAWNKVANVL FLDSPAGVGF SYTNTSSDEL TVGDKRTGED AYRFLVRWLE RFPEYKERAF 180
  181 YIAGESYAGH YIPELAQLIV NRNKGAKNPT INLKGILMGN PLVDDYNDNK GMRDYWWNHG 240
  241 LISDESYNDL TKWCLNDSIL FPKLNCNAAL NQALSEFGDI DPYNINSPAC TTHASSNEWM 300
  301 QAWRYRGNDE CVVGYTRKYM NDPNVHKSFH ARLNGSTPWT PCSRVIRKNW KDSPKSMLPI 360
  361 IKNLLQAHLR IWIFSGDSDA VLPLSGTRHS INAMKLKSSK RWYPWYHSHG LVGGWSQVYE 420
  421 DGLLTYTTVR AAGHEVPLSQ PRLALFLFTH FLANHSLPSS PS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle