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Protein Overview: gi|409090

General Information:
Name(s) found: gi|409090 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|409090|dbj|BAA03132.1| DNA topoisomerase IIA [Rattus norvegicus] [NCBI NR]
    • Organism: Rattus norvegicus
    Length: 214 amino acids

    Gene Ontology:
    Cellular Component: condensed chromosome [UNKNOWN]
    nucleus [UNKNOWN][IDA][IEA]
    cytoplasm [UNKNOWN]
    centriole [UNKNOWN]
    DNA topoisomerase complex (ATP-hydrolyzing) [UNKNOWN][IDA]
    nuclear chromosome [UNKNOWN]
    chromosome [IEA]
    protein complex [UNKNOWN]
    [NOT]nucleolus [UNKNOWN][IDA]
    nucleoplasm [UNKNOWN]
    Biological Process: embryonic cleavage [UNKNOWN]
    cerebellar granule cell differentiation [IEP]
    cerebellar Purkinje cell differentiation [IEP]
    chromosome condensation [UNKNOWN]
    DNA ligation [UNKNOWN]
    chromosome segregation [UNKNOWN]
    DNA topological change [UNKNOWN][IDA][IEA]
    brain development [IEP]
    response to DNA damage stimulus [UNKNOWN]
    aging [IEP]
    positive regulation of transcription from RNA polymerase II promoter [UNKNOWN]
    positive regulation of retroviral genome replication [UNKNOWN]
    response to drug [IEP]
    positive regulation of apoptosis [UNKNOWN]
    apoptotic chromosome condensation [UNKNOWN]
    positive regulation of viral genome replication [UNKNOWN]
    response to parathyroid hormone stimulus [IEP]
    Molecular Function: protein kinase C binding [UNKNOWN]
    DNA-dependent ATPase activity [UNKNOWN]
    protein homodimerization activity [UNKNOWN]
    drug binding [UNKNOWN]
    histone deacetylase binding [UNKNOWN]
    protein C-terminus binding [UNKNOWN]
    sequence-specific DNA binding [IDA]
    chromatin binding [UNKNOWN][IDA]
    structure-specific DNA binding [IDA]
    DNA binding [UNKNOWN][IEA][TAS]
    ATP binding [IDA][IEA][TAS]
    protein binding [UNKNOWN]
    ubiquitin binding [UNKNOWN]
    protein heterodimerization activity [UNKNOWN]
    DNA topoisomerase activity [IDA]
    DNA topoisomerase (ATP-hydrolyzing) activity [UNKNOWN][IDA][IEA]
    enzyme binding [UNKNOWN]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AQLAGSVAEM SSYHHGEMSL MMTIINLAQN FVGSNNLNLL QPIGQFGTRL HGGKDSASPR  60
   61 YIFTMLSPLA RLLFPSKDDH TLRFLYDDNQ RVEPEWYILI IPMVLINGAE GIGTGWSCKI 120
  121 PNFDVREVVN NIRRLLDGEE PLPMLPSYKN YKGTIEELAS NQYVINGEVA ILNSTTIEIT 180
  181 ELPIRTWTQT YKEQVLEPML NGTEKTPPLI TDYR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle