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Protein Overview: gi|5542088, gi|5...

General Information:
Name(s) found: gi|5542088 [NCBI NR]
gi|5542087 [NCBI NR]
gi|5542086 [NCBI NR]
gi|5542085 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|5542088|pdb|1B79|D Chain D, N-Terminal Domain Of Dna Replication Protein Dnab [NCBI NR]
  • gi|5542087|pdb|1B79|C Chain C, N-Terminal Domain Of Dna Replication Protein Dnab [NCBI NR]
  • gi|5542086|pdb|1B79|B Chain B, N-Terminal Domain Of Dna Replication Protein Dnab [NCBI NR]
  • gi|5542085|pdb|1B79|A Chain A, N-Terminal Domain Of Dna Replication Protein Dnab [NCBI NR]
    • Organism: Escherichia coli
    Length: 119 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASHMERDPQ VAGLKVPPHS IEAEQSVLGG LMLDNERWDD VAERVVADDF YTRPHRHIFT  60
   61 EMARLQESGS PIDLITLAES LERQGQLDSV GGFAYLAELS KNTPSAANIS AYADIVRER

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|189095939, gi... gi|5542088, gi|5...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] PSI-BLAST 44.69897 N-terminal domain of DnaB helicase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.05061864244584 bayes_pls_golite062009
  • hydrolase activity
    		•  0.44494241711137 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.28281187054875 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.28277583716495 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.28165889302373 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.27766094528151 bayes_pls_golite062009
  • ATPase activity
    		•  0.25346737810249 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  0.23919512904758 bayes_pls_golite062009
  • helicase activity
    		•  0.19288769515427 bayes_pls_golite062009
  • DNA-dependent ATPase activity
    		•  0.18576939059978 bayes_pls_golite062009
  • DNA helicase activity
    		•  0.18456169012231 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle